Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g4176 ATGGTGAGGTCTACAAGTTGTGAAAAAAATAGTGTCAAAAGGGATGTTATATGGATGGCAGAAGAAGATTCAAAGACATCTTCATTTGTCTCAGAGCATGGATCTGTTAATTTGACTTCTGTCCCCAAAAAAACAGGTGTTAAGAGATATGGAAAAAGTTGCAGGCTTAGGTGGAGTAAAACCATGCCTGATCTTAAGCATGATGATAAGTTCACATCCCAAGAAGAAGATCTAATCGTTAAGCTTCATGCAGCCATTGGTAGTAGGTGGTCTATCATAGCTCAACAACTTCCTGGGAGAACAGACAATGATGTAAAGAACAATTGGAACACAAAGCTGAAAAAGAAACTCTCTCAAATGGGGATAGACCCTGTTACCCACAAGCCTTTCTCTAAACTCATTGCTGATTATGGAAATATAGGTGGTGCTAATTGTCATATTAATCAAGACTTTAGGAATCAAAGATTGATCAGAAACACAAATGATCAATCAATTATGGATCTTTCACAGTTCCAAACCATTCCAATAAAAAAAATAAAGACAACATCAATGTTTGTAGAAGGATGCTTATCATCATCATCACTACCTACTGCATCTGCTTGTTCCTCCACTTCAACACAAGAAACAAACTTTTCTGCACCATTTAGTTGGAATGACTTTCTACTACAAGATGCTTTTGCACCACCTACTAATAACCTGCAAGAACAACAATTTTTTGATGGATTGTTATCAAAGAAAGAGGTCATGTCACACCAAGTCTCATCATCCTCAGACATTTCATTTGTTGAGGCCATACTCGATCAAGAAAATGAGATGTTTCTAAGCTTTCCTGAACTTTTGGAGGAACCATCCAATTACTGA 861 0.3705 MVRSTSCEKNSVKRDVIWMAEEDSKTSSFVSEHGSVNLTSVPKKTGVKRYGKSCRLRWSKTMPDLKHDDKFTSQEEDLIVKLHAAIGSRWSIIAQQLPGRTDNDVKNNWNTKLKKKLSQMGIDPVTHKPFSKLIADYGNIGGANCHINQDFRNQRLIRNTNDQSIMDLSQFQTIPIKKIKTTSMFVEGCLSSSSLPTASACSSTSTQETNFSAPFSWNDFLLQDAFAPPTNNLQEQQFFDGLLSKKEVMSHQVSSSSDISFVEAILDQENEMFLSFPELLEEPSNY* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g4176 286 Gene3D - 17 66 - -
Mal2g4176 286 Gene3D - 69 131 - -
Mal2g4176 286 Pfam Myb-like DNA-binding domain 70 111 IPR001005 -
Mal2g4176 286 PANTHER F14D16.11-RELATED 1 286 - -
Mal2g4176 286 SUPERFAMILY Homeodomain-like 48 121 IPR009057 -
Mal2g4176 286 PANTHER F14D16.11-RELATED 1 286 - -
Mal2g4176 286 ProSiteProfiles Myb-like domain profile. 70 113 IPR001005 -
Mal2g4176 286 CDD SANT 70 113 IPR001005 -
Mal2g4176 286 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 117 IPR017930 -
Mal2g4176 286 SMART sant 67 115 IPR001005 -
Mal2g4176 286 SMART sant 14 64 IPR001005 -
Mal2g4176 286 ProSiteProfiles Myb-like domain profile. 18 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g4176 Mal-Chr2 75965968 75967446 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g4176 1 282 MYB Transcription Factor Family AT3G28470 40.752 2.27e-57 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mal2g4176 Myb_DNA-binding 7.3e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g4176 K09422 - gmx:100795381 293.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g4176 2 75965968 75967446 Mal2g4176 2 75965968 75967446 ECH