Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g4142 ATGGGAAATTGTTGCTCCCAAGGCGGAGATACCCCGGCCGCTGCCGACAAGGGAGAAACCAACACAAACCATGATAACGAGCCATCAACAAACCCTATAACGACGCCACCACCAGCATCAAAACCACCACAAACAACCACACCTCCTCCATCAAAACCATCGAAACCGGCCCCGATGGGCCCCGTATTACAACGACCAATGGAGGACGTTCGAGCCACATACACCATAGGGAAAGAGCTAGGGAGAGGACAATTTGGGGTAACACATTTATGTACACATAAGGTAACAAAAGAACAATTTGCATGCAAAACAATTGCCAAGAGAAAACTAGTGAATAAAGAGGATATAGAAGATGTTAGAAGGGAGGTGCAAATAATGCATCACTTAACGGGCCAAGCAAACATTGTGGAACTAAAAGGTGCATATGAAGACAAACAATCGGTTCATTTGGTCATGGAATTATGTGCCGGTGGTGAATTATTTGATCGAATCATTGCAAAGGGACATTATACAGAACGTGCTGCAGCTTCTTTGATGAGAACCATTGTGCAAATTATTCATACTTTGCATTCAATGGGTGTTATTCATAGAGATCTTAAGCCTGAAAATTTCCTTTTGTTGAATAAAGATGAAAATGCACCCCTTAAAGCCACCGATTTTGGTTTATCCGTATTTTTCAAAGAAGGAGAGATGTTCAAAGACATTGTTGGCAGTGCATATTACATAGCACCAGAGGTGTTGAAGAGAAGATATGGGCCTGAAGTTGACATTTGGAGTATTGGTGTCATGCTTTACATTCTTCTTTCTGGTGTCCCTCCTTTTTGGGCAGAATCTGAACATGGTATATTCAATGCCATCTTAAGAGGCCACATTGACTTTACAAGCGATCCATGGCCATCAATTTCACCTGCAGCAAAAGATCTTGTAAGGAAAATGTTAAATTCAGATCCCAAACAAAGACTTACAGCCTATGAAGTTTTGAATCACCCTTGGATCAAGGAGGATGGAGAAGCACCAGATAAACCCATTGACAATGCTGTACTGAATAGGCTCAAGCAGTTTAGAGCAATGAACCAATTTAAGAAAGTTGCTCTAAGGGTAATTGCTGGATGTTTATCAGAAGAAGAAATAATAGGGTTGAAGGAAATGTTCAAGGGAATGGACACAGATAACAGTGGAACCATTACAATTGAAGAGCTCAAACAAGGACTTGCAAAGCAAGGTACCAAGCTTACAGAACAAGAAGTTAAGCAGTTGATGGAAGCTGCTGATGCTGATGGCAATGGAACAATAGATTACGACGAGTTCATCACAGCGACAATGCACATGAACAGAATGAATAGAGAAGAACATCTTTACACTGCCTTCCAATACTTTGATAAAGATAACAGCGGGTAA 1398 0.412 MGNCCSQGGDTPAAADKGETNTNHDNEPSTNPITTPPPASKPPQTTTPPPSKPSKPAPMGPVLQRPMEDVRATYTIGKELGRGQFGVTHLCTHKVTKEQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQANIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLMRTIVQIIHTLHSMGVIHRDLKPENFLLLNKDENAPLKATDFGLSVFFKEGEMFKDIVGSAYYIAPEVLKRRYGPEVDIWSIGVMLYILLSGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPAAKDLVRKMLNSDPKQRLTAYEVLNHPWIKEDGEAPDKPIDNAVLNRLKQFRAMNQFKKVALRVIAGCLSEEEIIGLKEMFKGMDTDNSGTITIEELKQGLAKQGTKLTEQEVKQLMEAADADGNGTIDYDEFITATMHMNRMNREEHLYTAFQYFDKDNSG* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g4142 465 SMART efh_1 415 443 IPR002048 GO:0005509
Mal2g4142 465 SMART efh_1 379 407 IPR002048 GO:0005509
Mal2g4142 465 Pfam EF-hand domain pair 380 440 IPR002048 GO:0005509
Mal2g4142 465 Gene3D Transferase(Phosphotransferase) domain 1 160 340 - -
Mal2g4142 465 CDD STKc_CAMK 74 331 - -
Mal2g4142 465 ProSitePatterns Protein kinases ATP-binding region signature. 80 107 IPR017441 GO:0005524
Mal2g4142 465 Gene3D - 350 465 - -
Mal2g4142 465 CDD EFh 380 439 IPR002048 GO:0005509
Mal2g4142 465 MobiDBLite consensus disorder prediction 16 30 - -
Mal2g4142 465 SUPERFAMILY Protein kinase-like (PK-like) 53 360 IPR011009 -
Mal2g4142 465 PANTHER SERINE/THREONINE-PROTEIN KINASE 21 465 - -
Mal2g4142 465 SUPERFAMILY EF-hand 372 465 IPR011992 -
Mal2g4142 465 Gene3D Phosphorylase Kinase; domain 1 75 159 - -
Mal2g4142 465 ProSiteProfiles EF-hand calcium-binding domain profile. 375 410 IPR002048 GO:0005509
Mal2g4142 465 SMART serkin_6 74 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g4142 465 ProSitePatterns EF-hand calcium-binding domain. 424 436 IPR018247 -
Mal2g4142 465 ProSiteProfiles Protein kinase domain profile. 74 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g4142 465 MobiDBLite consensus disorder prediction 1 65 - -
Mal2g4142 465 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Mal2g4142 465 Pfam Protein kinase domain 74 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g4142 465 ProSiteProfiles EF-hand calcium-binding domain profile. 411 446 IPR002048 GO:0005509
Mal2g4142 465 ProSitePatterns EF-hand calcium-binding domain. 388 400 IPR018247 -
Mal2g4142 465 PANTHER CALMODULIN-DOMAIN KINASE CDPK PROTEIN 21 465 - -
Mal2g4142 465 MobiDBLite consensus disorder prediction 31 60 - -
Mal2g4142 465 ProSiteProfiles EF-hand calcium-binding domain profile. 447 465 IPR002048 GO:0005509
Mal2g4142 465 Gene3D - 373 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g4142 Mal-Chr2 74024223 74026882 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g4142 1 465 EF-hand Containing Proteins AT5G12180 80.942 0.0 796
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mal2g4142 Pkinase 4.4e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g4142 K13412 - gmx:100781355 821.617
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g4142 2 74024223 74026882 Mal8g0704 8 10860443 10862883 PCT