Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g4133 ATGAGTGGAAATTCACCATGTGCTTCATGCAAGATTCTGAGACGCAGATGCACAAATGATTGCATCTTTGCTCCTTATTTTCCTTCTCTTGAACTCCAAAAGTTTTCCATAGTTCACAAGGTTTATGGCGCTAGCAACGTTGGCAAAATGTTGCAGAAACTTCCGATTGACCAAAGAGCAGATGCAGTGAGTACTTTAGTGTATGAAGCAAATGCAAGAGTGAGTGACCCAATTTATGGTTGTGTTGGAGCCATATATCACTTGCAAAATCAAGTTTCTGAGCTTCAAATGCAACTTGCAGTTGCTCATGCAAAGATACTCTACATCAAGATGCAAAACAAGCAATTGATTCCAACACCACCAATCAACCAAGATCAGACATCTTACTTTATTCCAGATGAACTCACTCAATACCTTAATTATGATGTTTCTTATTGA 438 0.3858 MSGNSPCASCKILRRRCTNDCIFAPYFPSLELQKFSIVHKVYGASNVGKMLQKLPIDQRADAVSTLVYEANARVSDPIYGCVGAIYHLQNQVSELQMQLAVAHAKILYIKMQNKQLIPTPPINQDQTSYFIPDELTQYLNYDVSY* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g4133 145 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
Mal2g4133 145 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 142 - -
Mal2g4133 145 PANTHER LATERAL ORGAN BOUNDARIES (LOB) DOMAIN PROTEIN 1 142 - -
Mal2g4133 145 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g4133 Mal-Chr2 73555486 73558194 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g4133 3 114 AS2 family AT2G30130 75.000 5.55e-60 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mal2g4133 LOB 6.7e-40 No_clan