Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g4076 ATGGAAGAACCAGTGGAGTTGCAATTAGAAGACAATACAATGTCTACGGAGAAAAATATTAAAAGAAAGCTTAAAACTCCTGCACAGCTTATGGGCTTGGAAAATTTTTATAATGAGCACAAATACCCCACAGAGGAAATGAAAGTTGAACTCGCTAATGAACTAGCGTTGACAGAAAAGCAAGTCTCGGGATGGTTTTGTCATAGAAGGTTAAAAGATAAGAGATTGATGAAAGGTGGATTATGTGCTGCTAATGGACGACAAGATCGATCAAGTGGTGTTGTTCAGGACCGGGTCAGTGGACTAGGGCAAGATTCATGTGGAAGCACTAAGCATGGTGACTACAGGTTTATGGATCTCAAAGAGGTTGAGAGTCATGGTCTCTATAATCATGAATTGTCAGTTGCAGATATGAACTATGCTCATAGAAACCATTATACAGAAAATGACAGTGAAACGGATAACACATCACCTGAGAGTAGCTCATCTTTGCAAGAACGATATTATCTTCAAGGACAGGATCCGCATAATAAGGAGCCTTCTAGACACGCAACTTCAAATGGATCTCTTCCACCCTTAAATCCTAATGGATATAAACCATCGGGATATTTAAAAGTGAAGAAAGAGATAGAGCATGCTGCTATAACTGCTGTTAAGAATCGGTTAGGAAGGTATTATCTGGAAGATGGTCCACTACTTAATGTAGATTTTGACACAATTCCTCCAGGGGCATTTGAATTTCAAACTGCAAATCCGGTTAATGAAGCATACCATGTTGCAAGCCCCTCTCTTTCAAATTCTCCGGATGTCTCTGCGGCAAAAAGGCAATCATGTCTTAACTCTAGATATGATTTACAAATGGAAGGAGGTGACTTGGATTCCTTGCATGATTCTGATTTCCAGGATGAGAAATCCCGCCAGCTTATTCAACAAAGAGCAAGTTTTCAGCGTCGTCCAATTCATACCAATCATTTGCCTGGCAAGAACTATCCCCTGGATTTGTACGTAGGGTCGACTGAGGAAGCACCTGCTTATAATAGCACTAGGAATCATAGAGTAGGCACTAAGCATGGTGTTGAAAGGATGAGATCTGATTCTGCTTCTAATCCTAGTAATCATCACTATGAAGAGAATAACCCTGCGATTAAAAAGACAGATCCACTACTACATGATTACAAAAACGGCAATGTGAAGAATGCACAAAGGATTGGATATGTAAAATCTGAACCTTCAAATTCATTGCGTAATTCTCGAATTTCTGTGGATTCTGAAGAAAGAGGGCTTTCTGAAAGGATGGCAAAGGAAGAAAAGTTTAATGGGATTAGCAAGATTAAAAAAGAATATCACGAGTCAGATGGAGTGAGAATTCCTTTGAGAGAAACAATGGTTGCAAAGAGAGCTAAATTTGATCTACTTCATCAATGTGATATTAAACAAGAACCTGTTTCTGAGATTGAATCAAGGAAAACTCAGAGATCTGCTGCGGAGATGTCATCTAGCTTTAGCGAGGATGATTAA 1518 0.3933 MEEPVELQLEDNTMSTEKNIKRKLKTPAQLMGLENFYNEHKYPTEEMKVELANELALTEKQVSGWFCHRRLKDKRLMKGGLCAANGRQDRSSGVVQDRVSGLGQDSCGSTKHGDYRFMDLKEVESHGLYNHELSVADMNYAHRNHYTENDSETDNTSPESSSSLQERYYLQGQDPHNKEPSRHATSNGSLPPLNPNGYKPSGYLKVKKEIEHAAITAVKNRLGRYYLEDGPLLNVDFDTIPPGAFEFQTANPVNEAYHVASPSLSNSPDVSAAKRQSCLNSRYDLQMEGGDLDSLHDSDFQDEKSRQLIQQRASFQRRPIHTNHLPGKNYPLDLYVGSTEEAPAYNSTRNHRVGTKHGVERMRSDSASNPSNHHYEENNPAIKKTDPLLHDYKNGNVKNAQRIGYVKSEPSNSLRNSRISVDSEERGLSERMAKEEKFNGISKIKKEYHESDGVRIPLRETMVAKRAKFDLLHQCDIKQEPVSEIESRKTQRSAAEMSSSFSEDD* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g4076 505 ProSiteProfiles 'Homeobox' domain profile. 16 76 IPR001356 GO:0003677
Mal2g4076 505 MobiDBLite consensus disorder prediction 481 505 - -
Mal2g4076 505 SUPERFAMILY Homeodomain-like 14 78 IPR009057 -
Mal2g4076 505 Pfam Homeodomain 21 75 IPR001356 GO:0003677
Mal2g4076 505 SMART HOX_1 18 80 IPR001356 GO:0003677
Mal2g4076 505 MobiDBLite consensus disorder prediction 361 386 - -
Mal2g4076 505 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 504 - -
Mal2g4076 505 MobiDBLite consensus disorder prediction 146 165 - -
Mal2g4076 505 CDD homeodomain 21 75 IPR001356 GO:0003677
Mal2g4076 505 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 504 - -
Mal2g4076 505 MobiDBLite consensus disorder prediction 173 200 - -
Mal2g4076 505 Gene3D - 12 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g4076 Mal-Chr2 70699558 70704499 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g4076 6 505 Homeobox Transcription Factor Family AT4G03250 37.100 4.73e-68 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Mal2g4076 Homeodomain 5.4e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g4076 - - mtr:MTR_3g045830 822.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g4076 2 70699558 70704499 Mal2g4076 2 70699558 70704499 ECH