Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g4013 ATGAGAGGTATCAATAACCATACAAGTCAGTTTTATGCAAATTTCATAGTGGTCCAGAATGGAAAGATAATTCCCCTGGAGGTTAAGAGTTCAGACACAATACTCAGTGTGAAGGAGAGAATTGTTGACAAGCAAGAGTTCCAAGTGCACCAACAAAATCTGATGTTTGACGGTATACCACTAAATGACAGCAAAACCCTTGCCGATTACAACATCAAAGATGAGTCAACCCTCGACGTCCTCCTCCGTCTCATGGGGGACTAG 264 0.4242 MRGINNHTSQFYANFIVVQNGKIIPLEVKSSDTILSVKERIVDKQEFQVHQQNLMFDGIPLNDSKTLADYNIKDESTLDVLLRLMGD* 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g4013 87 SUPERFAMILY Ubiquitin-like 14 86 IPR029071 -
Mal2g4013 87 Pfam Ubiquitin family 16 84 IPR000626 GO:0005515
Mal2g4013 87 ProSiteProfiles Ubiquitin domain profile. 15 87 IPR000626 GO:0005515
Mal2g4013 87 PANTHER POLYUBIQUITIN 8-RELATED 15 83 - -
Mal2g4013 87 PANTHER UBIQUITIN 15 83 - -
Mal2g4013 87 SMART ubq_7 12 83 IPR000626 GO:0005515
Mal2g4013 87 PRINTS Ubiquitin signature 64 85 IPR019956 -
Mal2g4013 87 PRINTS Ubiquitin signature 22 42 IPR019956 -
Mal2g4013 87 PRINTS Ubiquitin signature 43 63 IPR019956 -
Mal2g4013 87 Gene3D - 6 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g4013 Mal-Chr2 68005597 68007382 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g4013 15 86 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 54.167 8.73e-19 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g4013 - K08770 sspl:121786044 77.0257