Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g3989 ATGGAGCAGTCTGGAGAAAATTGGCCTTCTCATCCTATTTTGGAAATATGTGATGAACTCATTTTTGAAGATGGAGAACCTGAATCTGTGTATGAAGAGATTGGAAATCCTACCGATAGAAAGGGGAGAAATGAGAGGGAGATCAAAGAGAGAATGATGGAACTTTCATCCGCCATAGGCTTAAAGAAGATGGATGACACTTCGATCCTGGACAAAGCTAGAGACTACGTGGAAAAACTTCAAGATCGTGTGAAAGAGTTAGAACAAGAAGTTGGAGCCAACGTTTGTAGCAACAAAAGAACCAAACTGAATTCAAATGACTACAAATGTGGAACAAGTAATGATGATATTCTTCTTGAGGTGAAAGCAAAAGTGTTACAAAAGGAAGTTCTCATTATAATTCATTGTGAAAAACAAAATGGTGTCGTGCTCAAAATATTGGACCACCTTGAAAGTCTTCATCTTTCAGTAGTTAGCAGTAGTGTCTTGCGATTTGGAAAATCCATCTTTGACATCACCATCATTGCTCAGATGGGTGATGGCTACAACATTACAGTGGATGAATTAGTGAAAACTCTGAAAATAGTGATCTCAACACAATAG 603 0.3798 MEQSGENWPSHPILEICDELIFEDGEPESVYEEIGNPTDRKGRNEREIKERMMELSSAIGLKKMDDTSILDKARDYVEKLQDRVKELEQEVGANVCSNKRTKLNSNDYKCGTSNDDILLEVKAKVLQKEVLIIIHCEKQNGVVLKILDHLESLHLSVVSSSVLRFGKSIFDITIIAQMGDGYNITVDELVKTLKIVISTQ* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g3989 200 Coils Coil 70 90 - -
Mal2g3989 200 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 46 96 IPR036638 GO:0046983
Mal2g3989 200 Gene3D - 36 105 IPR036638 GO:0046983
Mal2g3989 200 PANTHER PROTEIN, PUTATIVE-RELATED 34 199 - -
Mal2g3989 200 PANTHER BHLH TRANSCRIPTION FACTOR 34 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g3989 Mal-Chr2 67474715 67478541 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g3989 43 198 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 36.095 1.40e-20 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g3989 - - gmx:100527052 184.496