Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g3986 ATGGAAGAGTCATGGGAAAATTTTCATCTTGACACGGAATTGGATTACGGTGATGATTATTTCATAGATAATTGCAACAACGTTAACATTGACGATGACGATTTTCTTAGAGAGATTTTGTTACAAACACCACAACAAGGCTTAATCTCTTCTGAAAGTGATCAAAGTCTTTATTCATATTTTCAAGTTCAAAACAATTCCGTTAACGTTAACGGTGGTGTTGATGAGGTTGTTGAGAACATGGTCAAAAGTAACAGTTCAAATTCAGTAGTGTCTGGAAAAGAAGAACAAAAACATGGTTTGAAATCGAAAAAGCAGGTTCCTCGTAGATGTTCTTCTCCAAAGACATATATTTTGTCATTTGATAATTCAACTATGGTACCTTGTGTTAATTTGGAAGGTGGTAAACGTGATTTAGGTTCTAAGAATCTTAAACGTAACCGTGAAAGTATTGAAAAAGGTGAAATGAAAACAAATCAACAAAATGGAGTGAAGAAAGGTAGAAACAGTTCTCAATGTATTGATCATATAATGGCTGAGAGAAAACGAAGACAAGAATTGACTGAAAGATTCATCGCACTTTCAGCCACTATTCCCGGATTGAGCAAGACAGACAAGGCTTCAATACTTCGAGCAGCAATTGATTATGTGAAACAGCTTAAAGAACGTGTTCATGAGCTAGAGAAACAAGACAAAAATGTTGGTGTCACAACAGTGATGGTCCACAACAAATCATGTGGAATTAATGAAGACACAAATTCTGATGAAACAAATTTTGATGATGATTGTCACAACAACATTCTTCCAGATATTGAAGCAAGAGTCATGGGAAAGGAAGTGCTTATTGAAATCCATTGTGAGAAACAAAATGGAATTGAGCTCAAATTACTTGACCACATTGAAAATCTTCAACTCTTTGTCACTGGTAGCAGTGTTTTGCCATTTGGGAAATCGGCTATTTCCATCACTATTATTGCTCGGATGGGTGAGGAGTGCAAAGTGACAGTGAATGATCTAGTGAAAAGCCTTAGGCAAATGCTATTAGGGAGTGCAAAATAA 1059 0.3588 MEESWENFHLDTELDYGDDYFIDNCNNVNIDDDDFLREILLQTPQQGLISSESDQSLYSYFQVQNNSVNVNGGVDEVVENMVKSNSSNSVVSGKEEQKHGLKSKKQVPRRCSSPKTYILSFDNSTMVPCVNLEGGKRDLGSKNLKRNRESIEKGEMKTNQQNGVKKGRNSSQCIDHIMAERKRRQELTERFIALSATIPGLSKTDKASILRAAIDYVKQLKERVHELEKQDKNVGVTTVMVHNKSCGINEDTNSDETNFDDDCHNNILPDIEARVMGKEVLIEIHCEKQNGIELKLLDHIENLQLFVTGSSVLPFGKSAISITIIARMGEECKVTVNDLVKSLRQMLLGSAK* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g3986 352 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 168 231 IPR036638 GO:0046983
Mal2g3986 352 Coils Coil 210 230 - -
Mal2g3986 352 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 1 350 - -
Mal2g3986 352 Gene3D - 160 234 IPR036638 GO:0046983
Mal2g3986 352 SMART finulus 177 226 IPR011598 GO:0046983
Mal2g3986 352 Pfam Helix-loop-helix DNA-binding domain 174 221 IPR011598 GO:0046983
Mal2g3986 352 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 171 220 IPR011598 GO:0046983
Mal2g3986 352 PANTHER BHLH TRANSCRIPTION FACTOR 1 350 - -
Mal2g3986 352 MobiDBLite consensus disorder prediction 85 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g3986 Mal-Chr2 67426312 67431367 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g3986 167 347 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 45.946 3.05e-42 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal2g3986 HLH 7.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g3986 - - mtr:MTR_4g009540 425.631