Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g3985 ATGGAAGAGTCGTGGGAAAATTTTCTTCTTGACGCGGAATTGGATTGCGGTGATGATTATTTCGTAGATAGTTGTAACAACCTTAACACTGACGATGACAATTTTCTTAGAGAGATTTTGTTACAAACACCACAACAAGGTTTAATCTCTTCAGAAAGTGATCATTCATTTTTTCAAGTTCAAACTGATTCCGTTAACGTTAACGAGGTTGTTGGAAACATGGTTAAAAGTAACAGCTCAAACTCAATAGTATCTGAACAACAACCAGAACAAGAACATGGTTTGAAATCGAAAAAGCAGGTTCCTCGTAGATGTTCTTCTGCAAAGACATATATTTTGTCATTTGATAATTCAACTATGGTACCTTGTGTTAATTTGGAAGGTGGTAAACGTGATTTAGGTTCTAAGAATCTTAAACGTAACCGTGAAAGTATTGAAAAAGGTGAAATGAAAACAAATCAACAAAATGGAGTGAAGAAAGGTAGAAACAGTTCTCAATGTATTGATCATATAATGGCTGAGAGAAAACGAAGACAAGAATTGACTGAAAGATTCATCGCACTTTCAGCCACTATTCCCGGATTGAGCAAGACAGACAAGGCCTCAATACTTCGAGCGGCAATTGATTACATGAAACAGCTTAAAGAACGTGTTCATGAGCTAGAGAAACAAGACAAAAATGTTGGTGTCACAACAGTAATGGTCCTCAACAAATCACCCAATTCATGTGGAATTAATGAAGACACAAATGTTGGTGAAACAAATTTTGATGATGATTGTCACAACAACATTCTCCCAGATATTGAAGCAAGAGTCATGGGAAAGGAAGTGCTTATTGAAATCCATTGTGAGAAACAAATTGGAATTGAGCTTAAATTACTTGATCATATTGAAAATCTTCAACTCTTTGTCACTGGTAGCAGTGTCTTGCCGTTTGGAAAATCCGCTATTTCCATCACTATTATTGCTCAGATGGGTGAGGAGTACAAAGTGAGAGTGAATGATCTAGTGAAAAGCATTGGACAAGTGCTCTTGAAACCTCAAATAGGATGCCAAAGTGATCCATACTAG 1071 0.3651 MEESWENFLLDAELDCGDDYFVDSCNNLNTDDDNFLREILLQTPQQGLISSESDHSFFQVQTDSVNVNEVVGNMVKSNSSNSIVSEQQPEQEHGLKSKKQVPRRCSSAKTYILSFDNSTMVPCVNLEGGKRDLGSKNLKRNRESIEKGEMKTNQQNGVKKGRNSSQCIDHIMAERKRRQELTERFIALSATIPGLSKTDKASILRAAIDYMKQLKERVHELEKQDKNVGVTTVMVLNKSPNSCGINEDTNVGETNFDDDCHNNILPDIEARVMGKEVLIEIHCEKQIGIELKLLDHIENLQLFVTGSSVLPFGKSAISITIIAQMGEEYKVRVNDLVKSIGQVLLKPQIGCQSDPY* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g3985 356 Coils Coil 204 224 - -
Mal2g3985 356 Gene3D - 154 228 IPR036638 GO:0046983
Mal2g3985 356 PANTHER BHLH TRANSCRIPTION FACTOR 1 347 - -
Mal2g3985 356 MobiDBLite consensus disorder prediction 78 100 - -
Mal2g3985 356 SMART finulus 171 220 IPR011598 GO:0046983
Mal2g3985 356 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 1 347 - -
Mal2g3985 356 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 162 225 IPR036638 GO:0046983
Mal2g3985 356 Pfam Helix-loop-helix DNA-binding domain 168 215 IPR011598 GO:0046983
Mal2g3985 356 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 165 214 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g3985 Mal-Chr2 67381907 67388750 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g3985 155 344 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 42.424 1.75e-38 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal2g3985 HLH 4.8e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g3985 - - mtr:MTR_4g009540 452.595