Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g3984 ATGAACATTGAAAACTTGTCACACGACCCCACAACACCAACAACCACTACCTTAAACTTTCAACAAACATCTCTCGAAGGAATCGCTGCTATTGTTGGAGAACAAATCCTCTACGGTTCCCACAACCCTAAAACAACATCATCAACAACTTGTGTTTCAAACCCTAAAACCAAAACAAAACCAACAAAAAACAACACAAACCCATCAAACAAGAACTATAGAGGAGTTAGAAAAAGACCATGGGGAAGATATTCAGCTGAAATACGTGATAGAATCGGTCGGTGTCGTCATTGGTTAGGAACGTTCGATACGGCGGAAGAGGCGGCGCGTGCTTATGACGCGGCAGCTAGAAGATTGAGAGGTTCTAAGGCAAGAACTAATTTTAAGATACCGTTGGTTTTGCCAATACCGTTGTCACCATCAACCTCATCTTCTTCGTCCTCGGATATGAAAGGTAAGAACAAGAAAAGTTTACATAGGAAGTGTTGTGTTGTTAGTTCTCTTGGAGAGTTGTTTAGTGGTGTGCCTGAAGTTAGAAGAGAAAGAGAAAGGGATAATAATGATAATGGAAATGGAAATGTAGTTTTTGGTGGTAGAAGCACTGGAATGGTTATGTAG 618 0.4078 MNIENLSHDPTTPTTTTLNFQQTSLEGIAAIVGEQILYGSHNPKTTSSTTCVSNPKTKTKPTKNNTNPSNKNYRGVRKRPWGRYSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNFKIPLVLPIPLSPSTSSSSSSDMKGKNKKSLHRKCCVVSSLGELFSGVPEVRRERERDNNDNGNGNVVFGGRSTGMVM* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g3984 205 MobiDBLite consensus disorder prediction 42 73 - -
Mal2g3984 205 SUPERFAMILY DNA-binding domain 72 130 IPR016177 GO:0003677
Mal2g3984 205 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 21 185 - -
Mal2g3984 205 MobiDBLite consensus disorder prediction 42 76 - -
Mal2g3984 205 Pfam AP2 domain 72 121 IPR001471 GO:0003700|GO:0006355
Mal2g3984 205 ProSiteProfiles AP2/ERF domain profile. 72 129 IPR001471 GO:0003700|GO:0006355
Mal2g3984 205 Gene3D AP2/ERF domain 71 130 IPR036955 GO:0003700|GO:0006355
Mal2g3984 205 SMART rav1_2 72 135 IPR001471 GO:0003700|GO:0006355
Mal2g3984 205 PRINTS Ethylene responsive element binding protein signature 73 84 IPR001471 GO:0003700|GO:0006355
Mal2g3984 205 PRINTS Ethylene responsive element binding protein signature 95 111 IPR001471 GO:0003700|GO:0006355
Mal2g3984 205 CDD AP2 71 130 IPR001471 GO:0003700|GO:0006355
Mal2g3984 205 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF084 21 185 - -
Mal2g3984 205 MobiDBLite consensus disorder prediction 179 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g3984 Mal-Chr2 67309887 67310504 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g3984 56 149 AP2-EREBP Transcription Factor Family AT3G15210 55.769 4.00e-27 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal2g3984 AP2 1.6e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g3984 - - cam:101490906 204.142