Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g3970 ATGGCAAGACCACAACAACGTTATAGAGGTGTACGTCAAAGACATTGGGGCTCTTGGGTTTCTGAAATTCGTCACCCTTTATTGAAGACAAGAATATGGTTAGGAACATTTGAAACAGCAGAAGATGCAGCAAGAGCATATGATGAAGCTGCAAGGTTAATGTGTGGACCAAAAGCACGCACCAATTTCCCATACAATCCAAATGGACCACAATCTTCTTCATCTAAGCTTCTTTCAGCAACTTTAACTGCAAAGCTAAATAAGTGTCACATGGCTTCTCTTTCTCTTCAAATGACCAAACAACAAGAAGCACCACAAAAAGAGCCACAAAAAGTTTCAACACAAAGTTTCAATTCTTCCATTAATAATAACACTTTTGTCTATGGCAATGACATTGGTGGAACAAGTGGTGAAACTAGTTTAATTAGATGGCTTGATGAAGGAAATAATTGTGTTGGTTTTGAAGGTCAAGTTGAAGTTTCTCATCAACAATTTCAACCGGTTCTTGAAGAAGATCACATTGAACAAATGATTCAAGAGTTGCTTGATTATGGTTCAATTGAGCTTTGTTCTGTTGATTCATCTTAG 588 0.3724 MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFPYNPNGPQSSSSKLLSATLTAKLNKCHMASLSLQMTKQQEAPQKEPQKVSTQSFNSSINNNTFVYGNDIGGTSGETSLIRWLDEGNNCVGFEGQVEVSHQQFQPVLEEDHIEQMIQELLDYGSIELCSVDSS* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g3970 195 PANTHER ETHYLENE RESPONSE FACTOR 1 191 - -
Mal2g3970 195 CDD AP2 6 66 IPR001471 GO:0003700|GO:0006355
Mal2g3970 195 Gene3D AP2/ERF domain 6 65 IPR036955 GO:0003700|GO:0006355
Mal2g3970 195 SMART rav1_2 7 70 IPR001471 GO:0003700|GO:0006355
Mal2g3970 195 Pfam AP2 domain 7 56 IPR001471 GO:0003700|GO:0006355
Mal2g3970 195 PRINTS Ethylene responsive element binding protein signature 30 46 IPR001471 GO:0003700|GO:0006355
Mal2g3970 195 PRINTS Ethylene responsive element binding protein signature 8 19 IPR001471 GO:0003700|GO:0006355
Mal2g3970 195 SUPERFAMILY DNA-binding domain 7 66 IPR016177 GO:0003677
Mal2g3970 195 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 1 191 - -
Mal2g3970 195 ProSiteProfiles AP2/ERF domain profile. 7 64 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g3970 Mal-Chr2 67061942 67063167 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g3970 1 192 AP2-EREBP Transcription Factor Family AT5G25190 63.542 1.01e-77 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal2g3970 AP2 8.5e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g3970 - - gmx:100777851 267.314