Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g3949 ATGGGAAGCGGTGGGAAATCGAATAAGGCTCCGGTCATGAAGAAAGGTGCTACACATGGAACTGTTTCTAAGCATGTGGCTGAAGAAACTCAGTTGTCTGCTGTTCCTTCTAAGACGAGTGATGGGAACCTCCGGTCGCCTATTTGCTGCATCATAGGTGATGCGTCCACTGGCAAAACCATGCTTATGGGTCGTATTCGAGGTAGAAATATCGAAGAAGGTCATGAAGCTTGCGGTTTCACGCACTATCCTGCTCAGAAAATACACGAAAGAAATCTACTGGTTATTGATGCACCAGGTCACCAATCATTCAAGGGTTCAGGTCTATGTGATATTGCAATTTTGGTTGTTGACATTATGCATGGCATACAGCCACAAACTATAGAGTTACTCAATCTATTAAAAAGGACCAACACAAAATTCATCGTTGCCTTGAATAAGGTGGACATGATTTGTGCCTGGAAAACATGTTGCAATGCTCCAATTCGTGAAGCATTAGTGCAGCAGTATGGGAGTGCTAAACATGAGTTTCATAGGAGGGTCACCAAGATTGTTTCTCAGTTCAAGATACTCGGCGTAAATACTCAATTGTATTATGAAAACAAAACAATGGGAGAAACATTCAGCATTGTGCCAACAAGTGCAATAAGTGGTGAAGGAATCACAGACATGTTATTTCTATTGTTTGAGTGGAACCAAAAGACCATGATTGAGAAATTTACGTACGGTGAAGACGTACAGTGTACTACTGTTTTGGAAGTCAAGGTTATCGAAGGTTATGGAACTACTATTGATGTTGTTTTAGTTAAAGGCGTTCTTCATGAAGGAGATGAAATAGTTGTGTCTGGAATGCAGGGTCCAATTTTTACTACAATTCGAGCTTTATTGACACCTCATCCAATGAATGAACTTTGTACCAAGGGATCATTTATGCATCACAAAGAAATCAAAGCTGTGACGGGCATCAAGATCACTGCCCAGGGACTTGAACATGCTATTGCTGGCGCTAGTTTGTATGTGGTGAAGCCTGATGATGATTTGGAATATGTTAAAAAAGCGGCGATGGAAGATGTGGAGTCAGTCTTGAGCAGGATAGACAGTAGTCGTGAGGGCGTTTGTGTCCAGGCATTTAAACTTTTGAAACAATTATAA 1152 0.4123 MGSGGKSNKAPVMKKGATHGTVSKHVAEETQLSAVPSKTSDGNLRSPICCIIGDASTGKTMLMGRIRGRNIEEGHEACGFTHYPAQKIHERNLLVIDAPGHQSFKGSGLCDIAILVVDIMHGIQPQTIELLNLLKRTNTKFIVALNKVDMICAWKTCCNAPIREALVQQYGSAKHEFHRRVTKIVSQFKILGVNTQLYYENKTMGETFSIVPTSAISGEGITDMLFLLFEWNQKTMIEKFTYGEDVQCTTVLEVKVIEGYGTTIDVVLVKGVLHEGDEIVVSGMQGPIFTTIRALLTPHPMNELCTKGSFMHHKEIKAVTGIKITAQGLEHAIAGASLYVVKPDDDLEYVKKAAMEDVESVLSRIDSSREGVCVQAFKLLKQL* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g3949 383 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5B 27 377 - -
Mal2g3949 383 MobiDBLite consensus disorder prediction 24 39 - -
Mal2g3949 383 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 27 377 IPR015760 -
Mal2g3949 383 Pfam Elongation factor Tu GTP binding domain 79 229 IPR000795 GO:0003924|GO:0005525
Mal2g3949 383 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 313 IPR027417 -
Mal2g3949 383 MobiDBLite consensus disorder prediction 1 39 - -
Mal2g3949 383 Gene3D Translation factors 244 366 - -
Mal2g3949 383 Gene3D - 38 243 IPR027417 -
Mal2g3949 383 CDD aeIF5B_II 250 356 - -
Mal2g3949 383 Pfam Elongation factor Tu domain 2 261 339 IPR004161 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g3949 Mal-Chr2 66380504 66384872 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g3949 35 379 Eukaryotic Initiation Factors Gene Family AT1G76810 62.162 1.49e-151 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g3949 K03243 - gmx:100814875 479.944