Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g3947 ATGACATTTACTCTGAAAGGAGGGAGTAGGCCACCATGGGTAGGTTTAGGAGAAGCAGTTTGGGTTCAAAAAGCATCAGGGAACACTTTTACTTTTCCTCTATACTCACACTCTTTGAAATTTATCTTAGGTTTCAACCAAAGACAGGTTACACTCCTTGGTGTGGGAAATGATATTGGCGAAAACGTTGGTTTGTTTCCTGGTATTGCTTGTATTAAGTTCCACCTTGGCTCATACTTTGTGTTGGTGCTTTTGCTTCTTTTGTTGGTTATGGTGTTCTTTGGCTTGCTGTTACCCAAACACTCTAATCTGCCTTACTTGTTGGAAAAGAGTATCCAACCAACTATTTCAGCAGAACGAATATTTGGTGGCCCTGTATTGGTAACGTGCTCGAATAGTTGCGTCTGCTTGTATGATTGGGCTGAATACAAATTGATAGCGAGCATGCCTTTGGATATGAACTTGCTTAAGAACGTCTCTTGGGCTGATAGCGGTGATCTATTGGTGCTTATTGGTGATATATCATTTATCATTCTGAAGTACAATCGTGATGATGTTTCATCATATCTAAAAAGTGGGGATGAGAAAGGTTATGAGGCCGTCGTGGGACTTTATTTAATAAGTGAACGTGTCAAGACATGGATCTGGGTCGGAGATGGTTTTATCTTTACCAATTCTTCTTGGAGCCTTAATTACTGTGTTTGTGGGGAGGTGACAACAATGATTCACTTGGACCGTCCGATGTACTTATTGGGATATCTTGCCAGCCAAAATAGAGTTTATTTGATTGACAAAGATTTCAATGTTGTGGGCTACACACTGCATTTAAGCTGGATTAAGTACAAGTCTTTTGTGATGTGTGGTGAATTTGAAAGGGCTAAAGAAATTTTGCCATCAATTCCAAAAGAGCATCGTAACAGCGTGGCTCATTTCCTGGAATCACGAGGCATGATTGAGGATGCCCTTGAAGTAGCTACTGACCCTGAGTACAGATTTGGTCTAGCCATACAGCATGGTAGTTTAGAGGTTGCAAAAGCTATTGCTATAGAAGTGAAGAGTGAATCTAAATGGAAGCAGTTGGGAGAATTAGCTATGTCTACTGGAAAGTTAGAAATGGCTGAGGAGTGTTTTGAACATACAATGGACTTCAGTGGATTGTTGCTTCTTTATTCTTCTATAGGAGATGCTGGAGGAATATCAAAACTTGCAACTCTTGCTAAAGAGAAAGGGAAGAACAACATTGCTTTCATTTGCTTATTTATGTTGGGTAAACTTGAAGACTGCCTTCAATTGTTAGTAGAAAGCAATCGGATTCCAGAAGCTACCTTGATGGCTCGATCGTATCTTCCAAGCAAGGTCTCAAATTTAGTGGAAGAATGGAGAAAAGATCTCAGCAAGGTTAATCCAAAAAATGCTGAGTCTTTGGCTGATCCTGAGGAGTATCCTAATTTGTTTGAAGATTGGCAAGTTGCACTTGCTGTTGAAGCTAAAGCTCGAAAAACAATGGGTGATTACCCTCCTGCAGTGCAGTACATTAACCATGATGGTAAATCACATGTCACCCTTATTGATTCTTTCAGAAATATGGAGAATGGGGTTAGCACTCAGCAGGTGGCGACAGCAGCGCTGGTTCTCCCTTTGGATCTGATTAGTGAAATCTTCTCCTATCTCCCTGTGAGATCTATATTAAATGTTGTCAGACGTCTCAATAGGTACTTCGACTATGTCATCCAAACTAAGCCTTTTGTTCAAATACATTTGGAGAAGTCGGGCTTTATAAACCCATACCTCACATTGATTTCGCAACCAGATGAAGTTCATCATGATTTCTGTCTTGTAACCGTGTCTGTTCATTCTTTATTGGAGGATCCAACTGCCACAACCCATCATGAGTCTTTTGTAGTGGACCAGTATTTCTACAATAGCTGA 1929 0.4044 MTFTLKGGSRPPWVGLGEAVWVQKASGNTFTFPLYSHSLKFILGFNQRQVTLLGVGNDIGENVGLFPGIACIKFHLGSYFVLVLLLLLLVMVFFGLLLPKHSNLPYLLEKSIQPTISAERIFGGPVLVTCSNSCVCLYDWAEYKLIASMPLDMNLLKNVSWADSGDLLVLIGDISFIILKYNRDDVSSYLKSGDEKGYEAVVGLYLISERVKTWIWVGDGFIFTNSSWSLNYCVCGEVTTMIHLDRPMYLLGYLASQNRVYLIDKDFNVVGYTLHLSWIKYKSFVMCGEFERAKEILPSIPKEHRNSVAHFLESRGMIEDALEVATDPEYRFGLAIQHGSLEVAKAIAIEVKSESKWKQLGELAMSTGKLEMAEECFEHTMDFSGLLLLYSSIGDAGGISKLATLAKEKGKNNIAFICLFMLGKLEDCLQLLVESNRIPEATLMARSYLPSKVSNLVEEWRKDLSKVNPKNAESLADPEEYPNLFEDWQVALAVEAKARKTMGDYPPAVQYINHDGKSHVTLIDSFRNMENGVSTQQVATAALVLPLDLISEIFSYLPVRSILNVVRRLNRYFDYVIQTKPFVQIHLEKSGFINPYLTLISQPDEVHHDFCLVTVSVHSLLEDPTATTHHESFVVDQYFYNS* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g3947 642 Gene3D - 276 484 - -
Mal2g3947 642 SUPERFAMILY F-box domain 543 598 IPR036047 GO:0005515
Mal2g3947 642 PANTHER COATOMER SUBUNIT BETA' 106 545 - -
Mal2g3947 642 Pfam Coatomer WD associated region 109 449 IPR006692 GO:0005198|GO:0006886|GO:0016192|GO:0030117
Mal2g3947 642 Pfam Nodulin-like 12 78 IPR010658 -
Mal2g3947 642 PANTHER COATOMER 106 545 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g3947 Mal-Chr2 66352677 66358488 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g3947 6 73 Nodulin-like Gene Family AT1G80530 63.235 8.50e-21 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g3947 K17302 - gmx:100797508 617.846