Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g3938 ATGAATCCTCTAAGGCTAGAACCATATCCATGCCTAAAACCTTCAATGGATAGAAAACACAAAAATGATTCATCTTCTCAACTTGTACTTGATCTAAGTCTCTCTAGCAAGGATCCATGTGGTGATTCAAAGTCCGAACTCAACCTCCTCAATTGTTTCCATGCAAATTTATCAGAAAGCTCCTCAGAATCAAGTCATGAGAATGAACTTGATCCGAGAGTTTTCTCATGCAACTATTGCCAAAGAAAGTTTTATAGTTCTCAAGCACTCGGAGGACACCAAAATGCACACAAGCGCGAAAGAACTTTGGCGAGAAGAGGCTTTACAACTAGCATGGCTTCTTCTCTACCTTCTTATGGTTTGTGTAACAAATCACTTGGCATTCAAGTGCATTCTATGATTAACAAACCTTCTTACCAAACACCCCTTTTTGGATTTTGTTCAAATGGACAAAATGGATGGAAAAGACAGAATTTTGAAACACAACCAGCTATTGGAAAGCTTCCATCTAGAAATTTTCATGTGAGGAATGAAACAGAACCATCGTTTGGTAGTGGCATTTCAAGGGTAGCCATGTTTCCTAAAGCATTGATGAATGAGGGATTTGGAAGTTACTTATTGGATAACAACACTTCACATTTGAAGTCTAAACAAGAGAAGTTGCAGAAGCTTGACTTGTCCCTTAAGCTCTAA 693 0.3838 MNPLRLEPYPCLKPSMDRKHKNDSSSQLVLDLSLSSKDPCGDSKSELNLLNCFHANLSESSSESSHENELDPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLARRGFTTSMASSLPSYGLCNKSLGIQVHSMINKPSYQTPLFGFCSNGQNGWKRQNFETQPAIGKLPSRNFHVRNETEPSFGSGISRVAMFPKALMNEGFGSYLLDNNTSHLKSKQEKLQKLDLSLKL* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g3938 230 MobiDBLite consensus disorder prediction 1 25 - -
Mal2g3938 230 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 11 230 - -
Mal2g3938 230 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 11 230 IPR044246 GO:0009788
Mal2g3938 230 ProSiteProfiles Zinc finger C2H2 type domain profile. 75 102 IPR013087 -
Mal2g3938 230 ProSitePatterns Zinc finger C2H2 type domain signature. 77 97 IPR013087 -
Mal2g3938 230 Gene3D Classic Zinc Finger 54 116 - -
Mal2g3938 230 SUPERFAMILY beta-beta-alpha zinc fingers 72 102 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g3938 Mal-Chr2 66230366 66231058 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g3938 17 230 C2H2 Transcription Factor Family AT5G10970 39.565 2.28e-33 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal2g3938 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g3938 - - mtr:MTR_4g006575 409.453