Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g3908 ATGTTTGATTCTGGTTACAAGTCACAGTATATTGGAGGTCAGAAGGAGAAATTTGTGAGGTTGGATGATTTGGATTCCAATTTGTCAACACCATCTAGCTCAAGTGGGATGAAGAAGTTAAGATTTAATTTAGATTCTTTGCCTATTCCTATTCCCGGCCGCGGAAAAAAAAATGCGTCGAAATCGTTTCGAGTTGGAGTGAAAAAGGGATCAGATGGACTAATGAATATTGGAAGATCACTCAAAAGTGGAGTCACTTGGGGAGTTTTTCCAGAAGATCTTAAAGTGTCACAGCAAAAAGTATTTGATCCTCAAGATAAGAATCTTCTATATTGGAACAAGTTTTTCGAGATTCTATGCATTCTTTCTGTAGCTTGTGATCCTTTCTTTTTTTATCTTCCTTATTTCAACCACAAATCATATTGTTTAGCCATAGATAACAAGCTAGCAAGTTTTATTGTTACATTGCGAACAATATGCGATTGTATTTATCTCATTCGCATAAGTTTCCAATTCCGCACTGCCTTCATTGCGCCTTCATCTCGAGTATTTGGAAGAGGTGAACTTGTTATAGATCCTGGATTGATCGCAAAGCGATATTTACAACGCTACTTCATTATTGACTTCTGGTCTGTACTGCCACTGCCACAGATTGTAGTGTGGAGGTATCTTTATAGCGCAAGACGTATGGAGGTATTGAATACAAAAACATCGCTATTGAGAAATGTCATCATGCAATATTTTCCAAGAATGGTACGATTTATACCTTTGGCTTCAGAAGTTAAAAAGACAGCTGGTGTTTTTTCTGAAAATGCGTTGCTTGGTGCTATGTACTATTTGATCTGGTATATGCTTGCTAGCCATATAACGGGTTCTGTATGGTACTTACTAGCGATAGAACGTAACGACACATGCTGGAAGATAGCATGTAAAGAAGTTGATGGATGTAATACACATTTCTTGTATTGTGGAAGTTCAAATAAGCATATACAAGGGTATGAAAATTGGAGAAATGTCAGTCAATCCGTGCTTAAAAGTAAATGCTTTGTTGAAGATGGTAACTCAGCTTTTAATTATGGAATCTTTTCTCAAGCTATAGAATCTTATATTGTTGCTTCCATAGAAGTTTTTCCCAAATTTTGTTACTGTCTATGGTGGGGACTTCAGAATTTAAGTACACTTGGTCAGGGGCTTCTGACTAGTACCTACCCTGGAGAGGTTATGTTTTCCATAGTAATAGCTATTATGGGGCTTGTGCTCTTTGCTCTTTTGATCGGAAACATGCAGACCTACCTTCAATCTATGTCGGTTCGTCTGGAGGAAATGAGGATCAAAAGGCGTGACTCCGAACAGTGGATGCATCATCGCTTGCTTCCTCCGGAGCTAAGGGAAAGAGTCAGGCGCTACGACCAATACAAGTGGTTGAACACCCGAGGGGTCGATGAAGAAAATTTGGTTCAGAGTCTTCCAAAAGATCTTAGAAGAGATATCAAACGCCATCTTTGTTTGAATTTAGTCAGAAGGGTTCCTCTCTTTGCTAACATGGACGAACGCTTGCTTGACGCGATATGTGAGCGATTGAAACCGAGTTTATATACAGAGGGAACTTACATAGTTAGGGAAGGTGATCCAGTTGATGAGATGTTGTTCATCATTCGTGGTCGTCTGGAGAGTGTTACTACAGATGGTGGAAGAAGTGGCTTCTTCAACAGAGGAGTTTTGAAGGAAGGTGATTTTTGTGGTGAAGAGTTGTTAACATGGGCATTGGATCCAAAATCTGCAACAAGCTTGCCATCATCAACAAGAACCGTGAAAGCTATGAGTGAGGTAGAGGCATTTGCTTTAGAAGCAGAAGAATTGAAGTTTGTCGCATCACAGTTTAGACACATACATAGTAGACAGGTTCAGCATACATTCCGTTTCTACTCGCAACAATGGAGAACATGGGCTGCAATCTATATTCAAGCTGCATGGAGGAAACATTTAAGGCGAAAACGAAGGAAAGAGGAAGAAGAATACTACGAATCTGATCTTGTGGGAAGTGATGATTCTGCAAGGGCATTGGTTCCGGGTCCTCAAAGTTCGTCAAGATTTGGACTTAATACAACAGTCTATGCTTCTCGGTTTGCTGCTAATCTTCGTGGTCATAGACTTCGAGTACCAAGTTCAAGAGAGCTGGTGAATATCCCAAAGCCCCCAGAACCTGATTTTAGTGCTCTCAATGAGGAAGAGTGA 2235 0.4004 MFDSGYKSQYIGGQKEKFVRLDDLDSNLSTPSSSSGMKKLRFNLDSLPIPIPGRGKKNASKSFRVGVKKGSDGLMNIGRSLKSGVTWGVFPEDLKVSQQKVFDPQDKNLLYWNKFFEILCILSVACDPFFFYLPYFNHKSYCLAIDNKLASFIVTLRTICDCIYLIRISFQFRTAFIAPSSRVFGRGELVIDPGLIAKRYLQRYFIIDFWSVLPLPQIVVWRYLYSARRMEVLNTKTSLLRNVIMQYFPRMVRFIPLASEVKKTAGVFSENALLGAMYYLIWYMLASHITGSVWYLLAIERNDTCWKIACKEVDGCNTHFLYCGSSNKHIQGYENWRNVSQSVLKSKCFVEDGNSAFNYGIFSQAIESYIVASIEVFPKFCYCLWWGLQNLSTLGQGLLTSTYPGEVMFSIVIAIMGLVLFALLIGNMQTYLQSMSVRLEEMRIKRRDSEQWMHHRLLPPELRERVRRYDQYKWLNTRGVDEENLVQSLPKDLRRDIKRHLCLNLVRRVPLFANMDERLLDAICERLKPSLYTEGTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFFNRGVLKEGDFCGEELLTWALDPKSATSLPSSTRTVKAMSEVEAFALEAEELKFVASQFRHIHSRQVQHTFRFYSQQWRTWAAIYIQAAWRKHLRRKRRKEEEEYYESDLVGSDDSARALVPGPQSSSRFGLNTTVYASRFAANLRGHRLRVPSSRELVNIPKPPEPDFSALNEEE* 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g3908 744 Gene3D Helix hairpin bin 438 502 - -
Mal2g3908 744 ProSiteProfiles IQ motif profile. 647 676 IPR000048 GO:0005515
Mal2g3908 744 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 8-RELATED 12 740 - -
Mal2g3908 744 CDD CAP_ED 511 642 IPR000595 -
Mal2g3908 744 SMART cnmp_10 511 642 IPR000595 -
Mal2g3908 744 MobiDBLite consensus disorder prediction 724 744 - -
Mal2g3908 744 Pfam Ion transport protein 111 438 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mal2g3908 744 Gene3D Jelly Rolls 509 629 IPR014710 -
Mal2g3908 744 SUPERFAMILY cAMP-binding domain-like 441 631 IPR018490 -
Mal2g3908 744 Gene3D - 114 436 - -
Mal2g3908 744 ProSiteProfiles cAMP/cGMP binding motif profile. 511 595 IPR000595 -
Mal2g3908 744 SUPERFAMILY Voltage-gated potassium channels 104 433 - -
Mal2g3908 744 Pfam Cyclic nucleotide-binding domain 532 621 IPR000595 -
Mal2g3908 744 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 12 740 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g3908 Mal-Chr2 65807609 65811433 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g3908 6 739 Ion Channels AT1G15990 67.112 0.0 992
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g3908 K05391 - gmx:100810453 1228