Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g3868 ATGGCCAAGAAATCTCAGAAAAATCACAAAACTACTTCTACTACTTCTTCTTCTTCTTCTTCCACCATGGTGAAACGTAAACGTAAAAGCATCCCAAGAAACTCACCTCCACAAAGAAGCTCAATTTACAGGGGTGTCACAAGACATCGTTGGACTGGTCGATATGAAGCTCATTTGTGGGATAAGAATTGTTGGAATGAATCACAAAGCAAGAAAGGAAGACAAGTATATCTAGGGGCATATGATGATGAAGAAGCTGCAGCACGTGCCTATGACTTGGCAGCATTAAAGTATTGGGGCCAAGACACAATTCTCAATTTTCAAGTATCCAATTATCAAGAGGAGCTTAAAGAGATGGAGGCACAATCAAAAGAAGAATATATTGGATCCTTAAGAAGGAAAAGCAGTGGATTTTCTAGAGGAGTCTCAAAATACAGAGGTGTAGCAAGACACCACCACAACGGAAGATGGGAAGCTCGAATTGGCAGGGTCTTTGGGAACAAATATTTATACCTTGGAACTTATGCTACACAAGAAGAAGCAGCCACGGCATATGACATGGCAGCAATAGAGTACAGAGGGCTTAACGCCGTTACAAACTTTGACCTTAGTCGTTATATCAGTTGGTTACATCCAAAAGGCAATGACGATAACCCTAACAACCATAATGAGAATCCTTGCAATAATCAGGAGCTAGATCTTAATCAAGAACTTGATGGTGGTGCCACATCAACATCTTCTACACCACCAACTGAAGAAATGTTAGAAAATACATCGTCTTCTGTTGAAGATAGTTACACTCCACCACCAGCTAAGTCAACCCATCTGCGTCGTACATTTCCAGAAGATATTCAGACAATCTTTGAAACTGAAGATTCAAGTATCTACACTGAAAATGATGATGAAAATATATTTGGTGACTTGAGTTCCATTGCTGCACCAATTTTTCATTATGGGTTTGGTGCTTGA 969 0.3994 MAKKSQKNHKTTSTTSSSSSSTMVKRKRKSIPRNSPPQRSSIYRGVTRHRWTGRYEAHLWDKNCWNESQSKKGRQVYLGAYDDEEAAARAYDLAALKYWGQDTILNFQVSNYQEELKEMEAQSKEEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYATQEEAATAYDMAAIEYRGLNAVTNFDLSRYISWLHPKGNDDNPNNHNENPCNNQELDLNQELDGGATSTSSTPPTEEMLENTSSSVEDSYTPPPAKSTHLRRTFPEDIQTIFETEDSSIYTENDDENIFGDLSSIAAPIFHYGFGA* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g3868 322 CDD AP2 143 204 IPR001471 GO:0003700|GO:0006355
Mal2g3868 322 MobiDBLite consensus disorder prediction 7 25 - -
Mal2g3868 322 Gene3D AP2/ERF domain 143 204 IPR036955 GO:0003700|GO:0006355
Mal2g3868 322 Gene3D AP2/ERF domain 42 110 IPR036955 GO:0003700|GO:0006355
Mal2g3868 322 PRINTS Ethylene responsive element binding protein signature 43 54 IPR001471 GO:0003700|GO:0006355
Mal2g3868 322 PRINTS Ethylene responsive element binding protein signature 184 204 IPR001471 GO:0003700|GO:0006355
Mal2g3868 322 SMART rav1_2 144 208 IPR001471 GO:0003700|GO:0006355
Mal2g3868 322 SMART rav1_2 42 114 IPR001471 GO:0003700|GO:0006355
Mal2g3868 322 SUPERFAMILY DNA-binding domain 143 204 IPR016177 GO:0003677
Mal2g3868 322 MobiDBLite consensus disorder prediction 1 45 - -
Mal2g3868 322 ProSiteProfiles AP2/ERF domain profile. 42 108 IPR001471 GO:0003700|GO:0006355
Mal2g3868 322 SUPERFAMILY DNA-binding domain 41 110 IPR016177 GO:0003677
Mal2g3868 322 PANTHER AP2 DOMAIN-CONTAINING TRANSCRIPTION FACTOR 1 225 - -
Mal2g3868 322 PANTHER AP2 DOMAIN-CONTAINING TRANSCRIPTION FACTOR 251 306 - -
Mal2g3868 322 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 225 - -
Mal2g3868 322 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 251 306 - -
Mal2g3868 322 Pfam AP2 domain 42 100 IPR001471 GO:0003700|GO:0006355
Mal2g3868 322 Pfam AP2 domain 143 194 IPR001471 GO:0003700|GO:0006355
Mal2g3868 322 MobiDBLite consensus disorder prediction 213 279 - -
Mal2g3868 322 ProSiteProfiles AP2/ERF domain profile. 144 202 IPR001471 GO:0003700|GO:0006355
Mal2g3868 322 MobiDBLite consensus disorder prediction 214 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g3868 Mal-Chr2 65092745 65098728 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g3868 138 210 AP2-EREBP Transcription Factor Family AT5G57390 40.741 5.95e-10 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Mal2g3868 AP2 4.3e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g3868 K09285 - gmx:100807781 420.624