Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g3857 ATGTCGTCCATCCCAATTTCACCTGACAAAAAAAAACGGGGATTTACTGGTACTCCACAAAAATTCGGCGACCCTCGGAGATTAGCTTCATTGATTAGATTTTGCGAAAAGCATAAGGATCGAAATTTCGACAAAAGAAATCGGTCTACTGTCTGTAAAGAGGTAGCATTAAGGATGCAAAGAAATAAAGGCCAATTTACATCTGCCAAGTCCAATCATGGTGAGTCTGCATCAGCTGAAATGAATTGCATAACAAGTGAAGGTTTGATGACAGGCAATAATGGATCCCAACAGCAAGATACTGTTTGTAGGCACTGTGCCGTCAGTGAGAAGTGCACACCAATGATGCGGTGTGGACCTGAAGGGCCAAGAACCCTATGCAATGCTTGTGGACTTTTGTGGGCAAATAAGATTTGCAAAAGAAATGTGAGGTAG 435 0.423 MSSIPISPDKKKRGFTGTPQKFGDPRRLASLIRFCEKHKDRNFDKRNRSTVCKEVALRMQRNKGQFTSAKSNHGESASAEMNCITSEGLMTGNNGSQQQDTVCRHCAVSEKCTPMMRCGPEGPRTLCNACGLLWANKICKRNVR* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g3857 144 MobiDBLite consensus disorder prediction 1 24 - -
Mal2g3857 144 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 97 142 - -
Mal2g3857 144 Pfam GATA zinc finger 103 137 IPR000679 GO:0006355|GO:0043565
Mal2g3857 144 PANTHER GATA TRANSCRIPTION FACTOR 28 1 142 IPR045280 GO:0006355
Mal2g3857 144 PANTHER GATA TRANSCRIPTION FACTOR 28 1 142 - -
Mal2g3857 144 Gene3D - 93 144 IPR013088 GO:0006355|GO:0008270
Mal2g3857 144 ProSiteProfiles CCT domain profile. 27 69 IPR010402 GO:0005515
Mal2g3857 144 Pfam CCT motif 27 69 IPR010402 GO:0005515
Mal2g3857 144 SMART GATA_3 97 144 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g3857 Mal-Chr2 64929700 64933595 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g3857 7 143 Tify Gene Family AT1G51600 58.993 5.15e-51 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mal2g3857 CCT 2.9e-09 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g3857 - - pvu:PHAVU_008G254600g 206.068