Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g3824 ATGTCTTCATCAAATTCACCATGTGCAGCATGCAAGTTTCTCCGACGAAAGTGCACCCAAGAATGCGATTTCGCTCCTTATTTTCTCCCTGAAAATCCACAGCGATTCGCGAATGTTCACCGTGTCTTTGGTGCAAGCAACGTCGCTAAGCTCTTAAAAGAGCTTAACGTGAAGGACCGTGAAGACGCGGTGAAATCTTTAGCATACGAGGCAGAGTCTCGTATAAAAGACCCGGTCTACGGGTGCGTTGGTTTCATCTCAGTTCTCCAACAGCGGTTAAGAGAAATCCAAAATGAACTCGCCACCGCGAAAAAAGAACTCGCCGGTTATAATTTGAATCCTCAAACTATGCAGCTTTTGTTGTCGAATCCCGGAACGGTTTTAATGCCTCAACAACAACAACAACAATGGAATAATAATTCACAATTCACAGGTTTTGCTAATTACTCTAACAATTTTCCTCATGAGATGGTTGGAGCTGGAGGTGGGTTAGTTATTCAGCAGCAACAAGAACAGGAGCTTCTAGAAGCTCAGCAGCAGTATCTTGCTTCTCAAGTTACAGCTCAGCAAGAGTATTTGCTTAGGTATGGTGGTGGACATCAGATGGGTGGTGGTGTTGCTGTTTCTGGTCATGCTGATGTGGCTCATCCTTTAGGTATGGGAAATTTTGATAATGTTGCTAATGGTGCTAATGGTGCTGGTGTCGGTGGCGGTGACGGCGGCGGTGGGGGATATTATCAGATTCAGCAACAAGGAGGAGAGCAGCAACATAATTATCATGTTGGTGGTGTTGCTCATGCTAATCCAGTTGAGGCACAGCTTTTGTTATCACCACAGAATCAGGAAGCTGGTGAGGATGGTAAAAGTGTTGGTAGTGCTCATCGTTCTAGTTGA 894 0.4508 MSSSNSPCAACKFLRRKCTQECDFAPYFLPENPQRFANVHRVFGASNVAKLLKELNVKDREDAVKSLAYEAESRIKDPVYGCVGFISVLQQRLREIQNELATAKKELAGYNLNPQTMQLLLSNPGTVLMPQQQQQQWNNNSQFTGFANYSNNFPHEMVGAGGGLVIQQQQEQELLEAQQQYLASQVTAQQEYLLRYGGGHQMGGGVAVSGHADVAHPLGMGNFDNVANGANGAGVGGGDGGGGGYYQIQQQGGEQQHNYHVGGVAHANPVEAQLLLSPQNQEAGEDGKSVGSAHRSS* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g3824 297 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 200 - -
Mal2g3824 297 MobiDBLite consensus disorder prediction 277 297 - -
Mal2g3824 297 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
Mal2g3824 297 Coils Coil 86 113 - -
Mal2g3824 297 PANTHER LOB DOMAIN-CONTAINING PROTEIN 32-RELATED 1 200 - -
Mal2g3824 297 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g3824 Mal-Chr2 63899411 63900304 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g3824 1 144 AS2 family AT5G66870 61.806 1.97e-56 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mal2g3824 LOB 2.1e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g3824 - - mtr:MTR_3g452660 388.652