Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g3772 ATGAGAAACAAAGCTGAATTGTGTGGTGCAGTGAGAGCAATTGAGCTTGCTTTTGAGAAGAATTGGAAGAACTTGTGGCTGGAATCTGATTCTAGTTTGGTGATAAAAGCTTTCAAAGAACCATCTCAGGTTCCTTGGGAAAAACAAAGGTTTTTGTTTTCTCTCATCTCATCACTAGTCCTTCCTCCTAACCATAACCCTAGATCGGAACTTCGAATCCGTATCATGGCAGAACCTTCTACCACCCCTCCTCCACCGGCGACTAAAAGCTGTGCCAATGATTCTCAATCCTCCAATGGTTCAGGAAAAACAGCTTGTTTTGTTCTTGGGATGCTTAGTCGTGTTGATTTAAGCTTGCAAGCTCTTCAAGCTCTCTGCATTTGCCCCACTAGAGAGATAGCTATTCAGAACATTCTGGTTCTCCGTAAGATGGGGAAGTACACGGGGATTAGCTCAGAATGTGCAGTTCCTATCAGCGGAGGAAGAACTCCGATATCAAAATGGCCACCTATCATGGCTCAAGTGCTTATTGGTACTCCTGGCACGATTGAGAAAATGATTACTTTCAAGAAACTTGAGTTGACAAAATTGAAGATTCTCGTTTTTGATGACGCTGATCAACTGTTTGCTGAGGATGGATTTAAAGATGATTCTTTGAGGATAATGAAGGCAATAGAAAAATCCAATTCAAACTGTCAGGTTCTTATGTTTTCTGCTACATTTAACGACACTGTCAAGAATTTGATTACAAGGATTGTTGACAAGGAGCATAATGAACTTTTTGTGAAGAAAGAGGATCTATCTTTAGCTGCTGTGAGTTTCATTTTCATGTTTAGGGCTGTATTTAACCTGATATGTGATGAAATGGATGAAAAGCTCATGTCGAAGATTGAAAACCATTTTGGCTCCCATGTAACAGAGGTTCCAGAAAGAAGTGTTGAAGACTTTAAAGCTGCTCTTAAGGAAGCTGGTTTGATATAG 981 0.4027 MRNKAELCGAVRAIELAFEKNWKNLWLESDSSLVIKAFKEPSQVPWEKQRFLFSLISSLVLPPNHNPRSELRIRIMAEPSTTPPPPATKSCANDSQSSNGSGKTACFVLGMLSRVDLSLQALQALCICPTREIAIQNILVLRKMGKYTGISSECAVPISGGRTPISKWPPIMAQVLIGTPGTIEKMITFKKLELTKLKILVFDDADQLFAEDGFKDDSLRIMKAIEKSNSNCQVLMFSATFNDTVKNLITRIVDKEHNELFVKKEDLSLAAVSFIFMFRAVFNLICDEMDEKLMSKIENHFGSHVTEVPERSVEDFKAALKEAGLI* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g3772 326 CDD RNase_H_like 3 59 IPR044730 -
Mal2g3772 326 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 97 253 IPR027417 -
Mal2g3772 326 SMART ultradead3 41 275 IPR014001 -
Mal2g3772 326 SUPERFAMILY Ribonuclease H-like 3 51 IPR012337 -
Mal2g3772 326 MobiDBLite consensus disorder prediction 78 100 - -
Mal2g3772 326 Pfam DEAD/DEAH box helicase 98 248 IPR011545 GO:0003676|GO:0005524
Mal2g3772 326 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 100 259 IPR014001 -
Mal2g3772 326 PANTHER DEAD-BOX HELICASE DBP80 95 272 - -
Mal2g3772 326 Gene3D - 94 272 IPR027417 -
Mal2g3772 326 Gene3D - 1 70 IPR036397 GO:0003676
Mal2g3772 326 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 95 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g3772 Mal-Chr2 62091167 62094717 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g3772 95 277 Eukaryotic Initiation Factors Gene Family AT1G72730 30.645 1.05e-20 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g3772 K18655 - gmx:100778091 258.84