Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g3768 ATGGCACGAATCAAACTCGTAAGAAGATCCATCGGAAATTTGCCAAAACTTATTCTTCGAGCTAATTTCCCATTGTCGAATCTACAACTTCCTGGTCCTTGTTACTCCTCCATTGATGGTGTTTGCATGGTTTGCAAACAAATGTCGTCTGTTGGAGCTATTGAAACTGTTTACTGCCAAACATGCCAAACTCCATGGCATCTTCCATGTTTTCCTTCGACAATCGATTGGGAATGCCCTGATTGTTTGTATGATCATTCTCTTACCGATGATGATGAAGGAGAAATTGTTGGTGGATCTCCTAAACCAGCTACTGAAACCAACAACGAACACAACAATGACGTGCTTGATAGATATTGTTCCTTCTGCATGGAGTTGCCTGAGAGACCTGTCACTACTCCATGTGGGCACAATTTTTGCTTAGAGTGTTTTGAGAAATGGATGAAGCACGGAAAACAAACTTGCCCAAATTGTAGGACTACAATTCCTCCAAAGGTGGCAAGTACTCCACGGATCAACACACAATTGGTGATCGCCATTCGTATGGCTAAGCTAGCTAGATTGGAGGTTGTTGGAGGAACCACTGCTCCAAAAGTTTATCATATTGTTCACAAGGATAAGCGACCTGACATTACTTTTATGACGGAAAGAGCTGTGAAATCAAGAAAAGTTAATGTTAATAGTGGGAAAATATTTGTGACCATTGCAAAAGATCATTTTGGACCTATTGTAGCTGAGAATGACCCTACTAGGAACCGTGGGGTTCTTGTTGGTGATATGTGGGAGGATAGGATGGAGTGCAGGAAATGGGGTGCTCATTTCCCCCCTATTGCGAGGATTGCAGGTCAAAGGAACCATGGTGCTCAATCAGTTGTTCTGTCTGGCGGTTACATTCACGATGAAGATCATGGTGACTGGTTTATTTACACAGGAAGTGGTGGCAAAAATGAGTTCGTGGATCAACAATATAATAATATAAATGAGGCCTTAAGACTCAGTTGCCTAAAAGGCTATCCTGTTCGTGTCATTAGGTCCCACAAGGATAAAAACTCCTCTTATGCACCGGAAGCAGGTTTGAGATACGATGGGGTTTATAGAATCGAGATATGTTGGTGCGAAATCGGAAAAAATGGTCAGAAGATTTGCAGGTATATGTTTATGAGGTGTGACAACGAACCAGCGCCATGGACAAGTGATTCGTCAGGAGACTGTCCCCGTCCACTACCTTTTATCGAGGAGTTTAGGGATGCAGTTGATATTATTAGAAGGAAGGATGATCCATCATGGGACTTTGATGAGGAAAATGGTTGCTGGTTTTGGAAGAAGCGTCCACCATTAAGTAAGAGGCCATTGAACATTGTGGATCCTATAGATGGAACAAAAACAAAAGTTGCTAAGCAAAAAGCAAAAAATGCGTCCTTCAAAATCAAGGATAGACTATTAATAGAGTTTGGTTGCAATATTTGTCGCAAGGTGTTGGTTTCCCCTCTTACTACACCTTGTGCTCACAACTTCTGCAAAGCTTGTCTTGAGGGTGAGTTTTTTGGACAAAGTTCTCAAAGTGGGCACAATTTGCAGCCACAGAAGAACATTATGAAATGTCCTACTTGTTTAACTGACATAACAGATTATCTTCAGAATCCCCAGGTTAATAGAGAAATGATGAGTGCCATAAAATCACTCCAGCTACAAGCTCAAGAGATGGAGGAGAGTTATGAAGAATCAAGTGGTAGAAGTGAGGAAAATCTCAAGCTAGGTGAGGAGAAAAAGGTTGCAAAACCCTGTGGTTCAAGTGAGGAAGTCTTGAAAGAGGCTATCGAGAATGATCTGAATCCTCAACGAAAGCGGAGGAAAGGTGCTCGTGGCAAGGCTGTCATGAACGTGGAGGAAAATTATTGA 1899 0.4197 MARIKLVRRSIGNLPKLILRANFPLSNLQLPGPCYSSIDGVCMVCKQMSSVGAIETVYCQTCQTPWHLPCFPSTIDWECPDCLYDHSLTDDDEGEIVGGSPKPATETNNEHNNDVLDRYCSFCMELPERPVTTPCGHNFCLECFEKWMKHGKQTCPNCRTTIPPKVASTPRINTQLVIAIRMAKLARLEVVGGTTAPKVYHIVHKDKRPDITFMTERAVKSRKVNVNSGKIFVTIAKDHFGPIVAENDPTRNRGVLVGDMWEDRMECRKWGAHFPPIARIAGQRNHGAQSVVLSGGYIHDEDHGDWFIYTGSGGKNEFVDQQYNNINEALRLSCLKGYPVRVIRSHKDKNSSYAPEAGLRYDGVYRIEICWCEIGKNGQKICRYMFMRCDNEPAPWTSDSSGDCPRPLPFIEEFRDAVDIIRRKDDPSWDFDEENGCWFWKKRPPLSKRPLNIVDPIDGTKTKVAKQKAKNASFKIKDRLLIEFGCNICRKVLVSPLTTPCAHNFCKACLEGEFFGQSSQSGHNLQPQKNIMKCPTCLTDITDYLQNPQVNREMMSAIKSLQLQAQEMEESYEESSGRSEENLKLGEEKKVAKPCGSSEEVLKEAIENDLNPQRKRRKGARGKAVMNVEENY* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g3768 632 Coils Coil 551 578 - -
Mal2g3768 632 ProSiteProfiles Zinc finger RING-type profile. 486 537 IPR001841 -
Mal2g3768 632 ProSiteProfiles YDG domain profile. 250 388 IPR003105 -
Mal2g3768 632 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED 111 594 IPR045134 -
Mal2g3768 632 SUPERFAMILY RING/U-box 481 563 - -
Mal2g3768 632 Gene3D - 223 405 IPR036987 -
Mal2g3768 632 ProSitePatterns Zinc finger RING-type signature. 501 510 IPR017907 -
Mal2g3768 632 Pfam RING-type zinc-finger 486 535 IPR027370 -
Mal2g3768 632 PANTHER FINGER PROTEIN, PUTATIVE-RELATED 111 594 - -
Mal2g3768 632 SUPERFAMILY PUA domain-like 226 408 IPR015947 -
Mal2g3768 632 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 474 594 IPR013083 -
Mal2g3768 632 SUPERFAMILY RING/U-box 119 166 - -
Mal2g3768 632 Pfam Zinc finger, C3HC4 type (RING finger) 117 162 - -
Mal2g3768 632 ProSiteProfiles Zinc finger RING-type profile. 120 159 IPR001841 -
Mal2g3768 632 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED 38 87 IPR045134 -
Mal2g3768 632 PANTHER FINGER PROTEIN, PUTATIVE-RELATED 38 87 - -
Mal2g3768 632 SUPERFAMILY FYVE/PHD zinc finger 35 84 IPR011011 -
Mal2g3768 632 MobiDBLite consensus disorder prediction 571 615 - -
Mal2g3768 632 SMART G9a_1 245 392 IPR003105 -
Mal2g3768 632 CDD RING-HC 120 158 - -
Mal2g3768 632 MobiDBLite consensus disorder prediction 568 632 - -
Mal2g3768 632 Pfam SAD/SRA domain 253 391 IPR003105 -
Mal2g3768 632 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 100 187 IPR013083 -
Mal2g3768 632 SMART ring_2 120 158 IPR001841 -
Mal2g3768 632 SMART ring_2 486 537 IPR001841 -
Mal2g3768 632 SMART ring_2 42 82 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g3768 Mal-Chr2 61995132 61998688 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g3768 39 571 C2H2 Transcription Factor Family AT5G39550 51.182 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g3768 K10638 - gmx:100786796 702.59