Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g3749 ATGTCGAGTGATTTTAGTTATATCAAAGATTTGAAGAAGGACTTGGATATCTGCAAACTTGGTTTTAGAGTTCTTGATTCATGGACCGTCACTGCTAGCAATGGTCGACAACACTTGGAACTTATAATAGGTAATGCCAAGGTTAGGGAATTTACCTCGGTTCATGTTGTGACTCGATATGCAGACTTTGAGTATTTGAAGTCATTTATTGAAGAGAATCATACTTATGTTTTGCATAATTGTCTTGTGTTCGATAATGATGTTGCGTTCAAGCCCGTTGATTATCCTTTTAAGGTTGTTTTTGGTGCTGGTACAAAGGTGACAAAAAATGACAACCTCACCGATATTCCTTCTCATGAATTTAGATTTAAGTCATTCAAGGAGATTGAAGAGGGAAAATTTAAGACGGATGTTTTATATGAAATCATCGGTCTTATACATGAGATTCGTAAGGTAACGGTAATTGGAAGTGGAAAAAAGCCTTGCACTAATATTGTGTTGAAAGATGAAAGTGGAAAGTTGGTTGATGTGACATTATGGGATCGATATTCTCTGGATTTATCGAAATATTTTGCTGAGCGAAAGGATACAGGGCCAGTTGTTTTGATATTAACTCATGCTCAATGCAAATTTGCAGATAATGATAAGCCAAATCTTTGCAACAATTGGTCGGGTTCAAAGTTGCTTATTAATTTTAAGCATCATGTCGTTGAGACATTTAGAGCTAGTTTTCGTACTGAAGGTCATGCTCTTAGTCAGAGTTTGTGTCAGGGTTCGTCTTCTTTTAAACGTTTTAAGGATGATGAATTTTCAAACCTCTCAAATGTTAGACCAATTTCTGAGTTTAGAGATTTAGTTCAGGAAACTTATTGCATCACTGTTGGGAGAATTTTTAAGTTCAATCCTAATCAATTTGGATGGTATTATGAAAGTTGTACTAAATGTGCAAAAGCTGCAAAGTTAAATGGTGCGAGTTACAAATGTTCATGTGGAGAGGAATATTTGGTTCCATTGACTAGATATAAGGTGGTTGTGCAAGTAGTATATGATGGTAATAGAGCTGATTTTTTATTCTGGGACAAGGAATGTCTTCAGATACTTGGTGTTACTGCTGATGCTCTTAGAAAGTCAATGCAAGAGGTTGGTGAAGATGATCCTAAGATATATCCTAAACATCTAGACAAATTGCTTGGACTTGAGCTTGTGATGCGTGTAAAGTATCAACCATATTATCGGCAAGCATCTGTTTTAAGTTTTTCACGTGATTCTGTTGTTATTGAGAAAATTAAGTCTCACATTCATCCTGATGAAATTCAGCCAGAGGTGCAAGAGGTTGATGAGGTTTGTTATGATTTCCTTTTGTGTTATTCTATTTATAATTCTTTGGTCTATTTATTAATTTATAACTTATATTTTATTATTGACTGTATTTTTGAAGAGTATTGTCTCCAATAA 1455 0.3471 MSSDFSYIKDLKKDLDICKLGFRVLDSWTVTASNGRQHLELIIGNAKVREFTSVHVVTRYADFEYLKSFIEENHTYVLHNCLVFDNDVAFKPVDYPFKVVFGAGTKVTKNDNLTDIPSHEFRFKSFKEIEEGKFKTDVLYEIIGLIHEIRKVTVIGSGKKPCTNIVLKDESGKLVDVTLWDRYSLDLSKYFAERKDTGPVVLILTHAQCKFADNDKPNLCNNWSGSKLLINFKHHVVETFRASFRTEGHALSQSLCQGSSSFKRFKDDEFSNLSNVRPISEFRDLVQETYCITVGRIFKFNPNQFGWYYESCTKCAKAAKLNGASYKCSCGEEYLVPLTRYKVVVQVVYDGNRADFLFWDKECLQILGVTADALRKSMQEVGEDDPKIYPKHLDKLLGLELVMRVKYQPYYRQASVLSFSRDSVVIEKIKSHIHPDEIQPEVQEVDEVCYDFLLCYSIYNSLVYLLIYNLYFIIDCIFEEYCLQ* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g3749 484 PANTHER REPLICATION FACTOR A 1, RFA1 43 409 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Mal2g3749 484 SUPERFAMILY Nucleic acid-binding proteins 287 408 IPR012340 -
Mal2g3749 484 PANTHER ANIMAL RPA1 DOMAIN PROTEIN 43 409 - -
Mal2g3749 484 SUPERFAMILY Nucleic acid-binding proteins 121 251 IPR012340 -
Mal2g3749 484 Gene3D - 114 254 IPR012340 -
Mal2g3749 484 Gene3D - 258 433 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g3749 Mal-Chr2 61492280 61494438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g3749 116 383 Core DNA Replication Machinery Family AT5G61000 25.623 5.80e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g3749 - - mtr:MTR_8g076570 645.58