Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g3685 ATGGTTGAGTTGGATATCCAGATCCCAACTGCTTTTGATCCATTCGCTGAAGCCATAGAATCGGATGCCCCCGGAGGGAAAGAGTATGTTCATATACGCATTCAGCAAAGGAATGGAAAGAAGAGTTTAACAACTGTTCAAGGGCTGAAAAAGGATTACAGCTACGAGAAGATTCTCAAGGATCTTAAGAAAGAGTTTTGCTGCAACGGGAATGTTGTGCAGGATAAAGAACTTGGTAAAATTATCCAACTCCAAGGTGATCAGAGGAAAAAAGTTTCTCAGTTTTTGGTTCAGGCCGGTCTTGTGAGGAAGGATCGGATAAAGATTCATGGTTTTTGA 339 0.4159 MVELDIQIPTAFDPFAEAIESDAPGGKEYVHIRIQQRNGKKSLTTVQGLKKDYSYEKILKDLKKEFCCNGNVVQDKELGKIIQLQGDQRKKVSQFLVQAGLVRKDRIKIHGF* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g3685 112 CDD eIF1_SUI1 28 111 IPR005874 GO:0003743
Mal2g3685 112 Pfam Translation initiation factor SUI1 27 100 IPR001950 GO:0003743|GO:0006413
Mal2g3685 112 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 1 112 - -
Mal2g3685 112 SUPERFAMILY eIF1-like 4 112 IPR036877 GO:0003743|GO:0006413
Mal2g3685 112 Gene3D - 1 112 - -
Mal2g3685 112 PANTHER BNAA03G11670D PROTEIN 1 112 - -
Mal2g3685 112 ProSiteProfiles Translation initiation factor SUI1 family profile. 30 100 IPR001950 GO:0003743|GO:0006413
Mal2g3685 112 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 5 112 IPR005874 GO:0003743
Mal2g3685 112 PIRSF Transl_init_SUI1_Euk 1 112 IPR005874 GO:0003743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g3685 Mal-Chr2 59632775 59633113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g3685 1 112 Eukaryotic Initiation Factors Gene Family AT5G54940 86.607 2.62e-70 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g3685 K03113 - vvi:100243506 206.453