Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g3647 ATGGCTTCATCTTTGGAGGAGCTTCTTGCAGCGGAAGGGTTCAAAGCAAGCAGCAGAAAAGTGCAAAGGTCAAGATCTTCTTTCCACCATGGTGCTTCAAGTGATCCACTTCACTCCTTGGAAGATAGACTCTGTGTATCATCAAGTGAAAGAATCAAAACACAGAAAACAAAGTCTAAAACAGCCTCAAGATATCAAATTAGCAATACAAGTGATAATAAGAACAAGAGATCAAGTGATAATAATGTGTTTACAGGAAACAAGATAGATCACCAACAGTTGAAGAACAATGAAACTGAGAAGAACAAGTCTTATAATTCATCTGACAGTGATAGTGGATTTGAAGATGTTTATTCAAACCAAGTGTCTAATGTGAAAAAAGGCAAAGATAAGAAGGAAAAATTGGGGGAAAAACCATTGAAGGATTCATATATGCTTAGACAATTGAGTGGGAATAGAAAAAATATAAAAGACCAAGAAAACTATATATCTAATAGTAATAGTAATAGCAAAAGCTATGAAGATAGAAAGAACAAAAATAGCAATCATGCTATGCAATTGCAAGATGCTTCTAGTCTTGCTATTGATGAAATTGCTGTGAAAGCACTAGTTTCCATTCTGAATGGATACATAGAAAGTTTTCTAAAGGATGAAGATTTTCGGTCGGCGTTGCGCCACAATTGTTTCTCCTCTTTGAATTTCATTCAACTTGAGGAGGAAAAACACAATTCTGAGACCAAAGTGATTACAAGTCTTGAGCAAGCAATTGAGTGCATAGAAAAAACTGCTGCTGAGGAAACTATATCTGCAACACATCTTAAAAGAGCAACAATGCAGCTTAGCATTATTACTGGTTTGAATTTGAATGATCTCAAGTACGATTTTACGTGCGGGATTCCAAATTTCAAGTTAGCAGCTTGTGCTCATCTTTACCTCAGTGTTGTATATTTGATACAAAGAAAAAAGAAAGTTTCAGCGAAGCATCTTTTGCAAGTGTTTTGCGATTCGCCTTTTCAGGCACGGACAATATTGTTGCCTGAACTTTGGGAGCGTCTATTTTCTCCACAAGTTTCTCATTTGAAGAAATGGTATAACAGCAAGGAAGGTGAAATTGCTTTAGTTTCACAAAGCAAAGCAAGAATGCTAAAGATTCTTCAGAAAGTGTATAATGAAAGTTTGGATTCAGGAACTCAATTATTTGCTTTATATTACAAAGATTGGCTCAGTGAAGGAGTAGAAACTCCAACTATTCCTTCTATTGGAATTCCATCATTATCCGTTATGAGTCGACAGGGAAGTTCACTTGGTCATTCTTTCGAGTCTTCTAGCTCCAATGAACCATTCTCACCTCAGGCAATGGTCAGCAAGAAACTTTATGATTCTTTCTTTGGTAGTAAACCTCAAGTCTATGAAGTTGAAGTTGATGAGGATGAAGATTGCTTTGAAAATTGTGAGAGAGGTGCTTATGGTTCAACCGTCGTTAAAAAAACATTAATATATGAATCAGAAACTGTTAAATATATTGATCAAAGTTCTGAAGATTTCACTCCAAGTGTACCAGTTCATGAATTATATATACCTCGGAAGGGAACATCAAGGACAGCTGCAGAAGAATGGAAAGAGAGGAATTCCAGAAATTCCACTAGAAAATATTTCTCCATAGAAACTAATTTAAACGGTCACATATTTAATGATCTACCACATGAAAAAGCAAATGAAATTTCTATCAAAAGGATGCAGTCAAATAAGATAACCTCAACTCTTGAAGGATCATATTCTCCAAGCATACCACAGGAATTCATTTGTCCTCTGACAAGAAATATCTTTGAGGAACCAGTTACCTTAGAGTCAGGTCAAACCTTTGAAAGAAAAGCCATCAAGGCATGGTTTCAAAAGGGAAACAGAACATGTCCAGTAACAGGAAATACTTTAGAATGTGTAGTCATACCATTTAGCAACCTTATTTTAAAGCGTTTGATCGATAACTGGAAGTCAGAAGATTTTGATCGCCTTCTTGATTTTGCCTCTCAAACGGTGGAAAACTCGAAGGAAATTAAGTTGAAAAAGCGTGACGAGGCTATCGTTTTCAAGTTACAAGGTCTTTTCTCTTCCTTGAAAGAAGAGGAAAAATCAACTTATGCTAAGCATATAATCTCTTTAGGGGTTCTTTCATTTCTTTGTAGGAGGTTTGAACAAGGAAATTTGGAAGAAAAATCACATGTGATAGAGATCTTGTTATATTGTATTCGATCAGATTCTTCTAGTTGCATATATAAGATAGCAAGAGGTGTCAACAGAAAATTTCTTCATGAGCTTCTTCACAGCAAGGTGCCTAACCCAACAACAAATGCAATACTATTCCTTGCTGAACTTGTGTCAATGAAGAGAAGAAAGGATGTTACTTCTTTCATAAGTGGCTTGGTGGGTGAAGATGTAGTTAGTACAATGCATATTGTGCTCATGCATCTCAAGAATTCTTCTCCAATTGAAAAGCCTCTCATTGCTGTCCTCTTATTACACTTTGAACTAATGGTTGAGCAGCCTCAAAAGTTTAGCATATACATAGAGATGGCTGTGAATGCCATTGTAGAGGCACTTGATGCCAGCTTAAACGATGACAAGGTTCAAAAGAAGTGTTGCACAGCTCTTTTAATCTTGTGTGGCCATTTTTCTTCCACTGGAATGATAACAACCAAGACTAGCATCTTAAAGCAAGCAGGTTATAGTAATGGTAGCTCAGAATTGAAATCTCCTAGCCTTGATGAAGAGGATCAGCAATTAAATGTAACCATTTCATCGGAAGATGAAGAAGAAGAAGAAAGGGATGAAGAGTTCATAGCGAACTTGTTAGAATCAATGATTGGTGATGGAGAAAGTCCATTTTTGAAGACCATATCTAGATGTTTAGATTCTAAACATGTAGATTTGGTGAGGGCTTGTCTAATAACTGTAACATGGTTGAGTTCCTCACTTTCCAAACAGCATAATGCTGGATTGCATCTTCCTGCCTTCTTAGCCATCATCTCTCATCTTAAAGGAATCCTACAAAATGGAGAACTTGAGCTCCAAACTCTTGCATCTATGTCCTTGTTTAACTTCAGTAAAATATCAGAATGCAGAACACTTTTGAAGATTATGGCAGAAAACATTGCTCCCCTTCTTCATGGACTAGTTGATGAATTATGGACTGCTAAGAAACTGCATGCCATTTTGTGTAGGGAGAATCTGTAG 3231 0.3649 MASSLEELLAAEGFKASSRKVQRSRSSFHHGASSDPLHSLEDRLCVSSSERIKTQKTKSKTASRYQISNTSDNKNKRSSDNNVFTGNKIDHQQLKNNETEKNKSYNSSDSDSGFEDVYSNQVSNVKKGKDKKEKLGEKPLKDSYMLRQLSGNRKNIKDQENYISNSNSNSKSYEDRKNKNSNHAMQLQDASSLAIDEIAVKALVSILNGYIESFLKDEDFRSALRHNCFSSLNFIQLEEEKHNSETKVITSLEQAIECIEKTAAEETISATHLKRATMQLSIITGLNLNDLKYDFTCGIPNFKLAACAHLYLSVVYLIQRKKKVSAKHLLQVFCDSPFQARTILLPELWERLFSPQVSHLKKWYNSKEGEIALVSQSKARMLKILQKVYNESLDSGTQLFALYYKDWLSEGVETPTIPSIGIPSLSVMSRQGSSLGHSFESSSSNEPFSPQAMVSKKLYDSFFGSKPQVYEVEVDEDEDCFENCERGAYGSTVVKKTLIYESETVKYIDQSSEDFTPSVPVHELYIPRKGTSRTAAEEWKERNSRNSTRKYFSIETNLNGHIFNDLPHEKANEISIKRMQSNKITSTLEGSYSPSIPQEFICPLTRNIFEEPVTLESGQTFERKAIKAWFQKGNRTCPVTGNTLECVVIPFSNLILKRLIDNWKSEDFDRLLDFASQTVENSKEIKLKKRDEAIVFKLQGLFSSLKEEEKSTYAKHIISLGVLSFLCRRFEQGNLEEKSHVIEILLYCIRSDSSSCIYKIARGVNRKFLHELLHSKVPNPTTNAILFLAELVSMKRRKDVTSFISGLVGEDVVSTMHIVLMHLKNSSPIEKPLIAVLLLHFELMVEQPQKFSIYIEMAVNAIVEALDASLNDDKVQKKCCTALLILCGHFSSTGMITTKTSILKQAGYSNGSSELKSPSLDEEDQQLNVTISSEDEEEEERDEEFIANLLESMIGDGESPFLKTISRCLDSKHVDLVRACLITVTWLSSSLSKQHNAGLHLPAFLAIISHLKGILQNGELELQTLASMSLFNFSKISECRTLLKIMAENIAPLLHGLVDELWTAKKLHAILCRENL* 1077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g3647 1076 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 595 668 IPR013083 -
Mal2g3647 1076 CDD RING-Ubox_PUB 600 641 IPR045210 -
Mal2g3647 1076 MobiDBLite consensus disorder prediction 59 92 - -
Mal2g3647 1076 MobiDBLite consensus disorder prediction 106 124 - -
Mal2g3647 1076 ProSiteProfiles U-box domain profile. 595 670 IPR003613 GO:0004842|GO:0016567
Mal2g3647 1076 MobiDBLite consensus disorder prediction 12 182 - -
Mal2g3647 1076 SMART Ubox_2 599 663 IPR003613 GO:0004842|GO:0016567
Mal2g3647 1076 Gene3D - 686 1071 IPR011989 -
Mal2g3647 1076 PANTHER OS04G0584500 PROTEIN 1 1074 - -
Mal2g3647 1076 SUPERFAMILY ARM repeat 705 1058 IPR016024 -
Mal2g3647 1076 SUPERFAMILY RING/U-box 591 666 - -
Mal2g3647 1076 Pfam U-box domain 596 666 IPR003613 GO:0004842|GO:0016567
Mal2g3647 1076 PANTHER OS04G0584500 PROTEIN 1 1074 - -
Mal2g3647 1076 MobiDBLite consensus disorder prediction 148 171 - -
Mal2g3647 1076 MobiDBLite consensus disorder prediction 125 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g3647 Mal-Chr2 58344746 58354636 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g3647 580 663 U-box Gene Family AT3G46510 38.095 1.22e-12 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g3647 - - ccaj:109801846 1285.01