LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal2g3584	ATGGACACCGCCGCCGGCGAAACTCAATTCCGGCGACAATCCTCCGGCGAAATGGAACACCATTCTGAAGATCCAAATAAAACCGGGTCCGCTTCACGACCCGATTCTGCTTCCGACGTACCCACCACTTCCGGAGCTAGATACAAGCTGATGTCTCCGGCGAAGCTTCCGATCTCTAGGTCGCCGGTTTTAACGATTCCACCGGGATTAAGTCCGACTTCGTTTCTAGAATCACCGGTTTTACTCTCAAATATGAAGGTAGAACCTTCACCTACAACAGGTTCCCTTCCTAGGCTACAACAAACAGCACATGGTTTTGTAACTTCTTCTACGTCCACTACGTTTCCTGTAACCTCTGTGGGCTTCAATTCTAATTCTGTTGACGACGGAAAATCCAGCTTCTTTGAGTTCAAACCGCATAGTAGATCGAATATGGTTCCTGCTGACTTTTACAACCATGCATGTGAAAAATCTACTCAAATAGACGGTCAAGGAAATGTTCAATCTTTTGTCTCGTCACCTCTGGTCAAAAGTGAAACGGCAGTCCCTTCAGATGAAATAAGTCTATCATCATCACCTGTTCAAATGGTTAGTTCAGGGGCTAGTGCTCATGTTGAAGTCGATTTGGATGAATCAAATCCCGGTGGCAGCATAGCAGCTGGGCTTCAAGCAATACAAGTTGATGGTCGGGGTAGTGGACTTTCAGTTGCTGCTGACAAGGTATCTGATGATGGATACAATTGGCGAAAATATGGGCAGAAGCTTGTTAAAGGATGTGAGTTTCCTCGCAGTTATTACAAATGCACGCATCCTAACTGTGAAGTGAAGAAACTATTCGAACGGTCTCATGACGGCCAAATCACTGAGATAGTTTACAAGGGAACACATGATCATCCTAAACCTCAACCAAGCCGTCGATACTCTGGTGGAAATATGATGTCTGTGCAAGAAGAGAGATCTGATAGGGCTTCTTTGACTAGCCGAGATGACAAAGGCTTTAATAATTATGGTCAGATGTCTCATGCAGCTGAGCGTGACAGTACTCCAGAGCTATCGCCTATTGCAACAAATGATGGTAGTCCAGAGGGTGCAGGGTTTTTGTCAAACCAGAATAACGATGAGGTTGATGAAGATGATCCTTTCTCAAAGAGAAGAAAAATGGATCTTGACATCACACCGGTAGTTAAGCCTATCCGGGAGCCCCGGGTCGTTGTACAAACTCTTAGTGAGGTTGACATATTGGATGATGGTTATCGCTGGCGTAAATATGGGCAGAAGGTGGTAAGAGGCAATCCTAACCCTAGGAGCTATTACAAATGCACAAATGCCGGTTGCCCGGTTAGAAAACACGTGGAAAGAGCATCTCATGATCCGAAAGCTGTAATAACAACATACGAGGGTAAACACAATCATGATGTACCAACTGCAAGGCATAATAGTCATGATATGGCAGGACCATCAGCTGCAAGTGGACAGACAAGAATCCGGCAAGAAGAAAGTGATACTATTAGCCTTGACCTTGGAATGGGCCTCAGCCCAACTGCCGAAAATAGACCAAATAATCTAGGGAGAATGATGCGCAATGAATATGGTGACAGTCAAACACATACCGGCAATTCCAGTTTCAAGTTTGTTCATAGTTCTACACCACCTCCGGTATACTTTGGTGTACTAAATAACAACTCAAATCCATATGGTTCTAGAGAAAATCCGAGTGATAGTTCATCTTTAAACCGTTCTGCTTATCCTTGCCCGCAGAACATGGGAAGAATAATTATGGGTCCCTAA	1788	0.4463	MDTAAGETQFRRQSSGEMEHHSEDPNKTGSASRPDSASDVPTTSGARYKLMSPAKLPISRSPVLTIPPGLSPTSFLESPVLLSNMKVEPSPTTGSLPRLQQTAHGFVTSSTSTTFPVTSVGFNSNSVDDGKSSFFEFKPHSRSNMVPADFYNHACEKSTQIDGQGNVQSFVSSPLVKSETAVPSDEISLSSSPVQMVSSGASAHVEVDLDESNPGGSIAAGLQAIQVDGRGSGLSVAADKVSDDGYNWRKYGQKLVKGCEFPRSYYKCTHPNCEVKKLFERSHDGQITEIVYKGTHDHPKPQPSRRYSGGNMMSVQEERSDRASLTSRDDKGFNNYGQMSHAAERDSTPELSPIATNDGSPEGAGFLSNQNNDEVDEDDPFSKRRKMDLDITPVVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPTARHNSHDMAGPSAASGQTRIRQEESDTISLDLGMGLSPTAENRPNNLGRMMRNEYGDSQTHTGNSSFKFVHSSTPPPVYFGVLNNNSNPYGSRENPSDSSSLNRSAYPCPQNMGRIIMGP*	596

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal2g3584	595	MobiDBLite	consensus disorder prediction	476	498	-	-
	Mal2g3584	595	Gene3D	WRKY domain	399	475	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Mal2g3584	595	Gene3D	WRKY domain	234	302	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Mal2g3584	595	MobiDBLite	consensus disorder prediction	558	588	-	-
	Mal2g3584	595	Pfam	WRKY DNA -binding domain	243	299	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Mal2g3584	595	Pfam	WRKY DNA -binding domain	415	471	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Mal2g3584	595	MobiDBLite	consensus disorder prediction	558	583	-	-
	Mal2g3584	595	PANTHER	TRANSCRIPTION FACTOR WRKY FAMILY-RELATED	32	575	-	-
	Mal2g3584	595	MobiDBLite	consensus disorder prediction	13	28	-	-
	Mal2g3584	595	ProSiteProfiles	WRKY domain profile.	409	474	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Mal2g3584	595	MobiDBLite	consensus disorder prediction	291	384	-	-
	Mal2g3584	595	PANTHER	WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED	32	575	IPR044810	GO:0003700
	Mal2g3584	595	MobiDBLite	consensus disorder prediction	1	53	-	-
	Mal2g3584	595	SUPERFAMILY	WRKY DNA-binding domain	240	301	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Mal2g3584	595	SUPERFAMILY	WRKY DNA-binding domain	406	474	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Mal2g3584	595	MobiDBLite	consensus disorder prediction	29	45	-	-
	Mal2g3584	595	ProSiteProfiles	WRKY domain profile.	237	301	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Mal2g3584	595	SMART	WRKY_cls	414	473	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Mal2g3584	595	SMART	WRKY_cls	242	300	IPR003657	GO:0003700\|GO:0006355\|GO:0043565

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal2g3584	Mal-Chr2	56155194	56161874	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal2g3584	51	595	WRKY Transcription Factor Family	AT4G26640	56.318	0.0	533

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Mal2g3584		WRKY	1.5e-25	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal2g3584	-		-	gmx:100781491	922.154

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mal2g3584	2	56155194	56161874	Mal8g0314	8	4401105	4405065	PCT