Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g3568 ATGGAAGGGGGTGCAAGTAGTAAAACTGAGAACATTAGTTGGGAAGTTGAACTAAAGAAGTGTAAGAATGTTATAGCTTCAGGTACCAAATCTATGAAAATTAAAGCTATTCTTATGCTGGCCAATCACTCGAAACAATCCCCGGAACATGTATTGTCTAGCTTCATAACGATTCTCATCGAGATTCTTGTTCGTAATATTGCAACTGATTTTGTTCCTGATTTACTTCAAGAGGCTGTTGTTTATTGCTTGAAGTGCATTGCTTGCAGAGGTGATGGTAGTTTGGCAATTGAAATGGGTGAACATGGTGTTGCATATGCTTTGATAAGATTGTTAGCTTGTGTCGAGGGAAAGATGCAAAAAGTAGTGATAAAATGTTTGTTGGTTGTTGTAAGTTTTTGTGATACAAGTAGGACAGTTGTTGCAGCTAGTGGTGGGTTAGAAATTATTATCAGTTTGTTGAATACTTGTAGTAATGATGTTAGATTGTATTTGTTAGAGATTTTGAGCGCATTGGCGCTTCAGAGGGAAGTTAGGAAGGGACTGATTAGGTTAGGAGCTCTTCGTTTTATTGTAGAGGCTGCTGGTGTTGGTAGCATGATTTCGAGGGAAAGGGCATGTCAATCGATTGGATTGGTTGGAGTTTCGAGACAAGCTAGGCGCACCCTTGTTGAACTGGGAGTGCTACCCGTGCTTGTGGAGTTGTTTCGCGTTGGAGATAACACGACAAAACTTGTAGCTGGCAATACTCTTGGTGTGATATCTAATCATGTTGATTGCATCAGACCAGTTGCTGAAGCTGGGGCTATACCTCTTTATGCTGAGCTTCTTGAAGGATCCGATGATTCTAAGGAGATAGCCAAGGAAGTGTTTTGTATATTGGCTGTTGCAGAGGCGAATACTGTTGAAATTGTTGGTCACTTGATGAGAATTCTTAGAGAAGGTGATGATGAAGCTAAAGTAGCAGCTGCTCATGTGATTTGGGATATATCGGCATACATGCACACAACTTCTGTGCTTCGGGCTTCAGGTGCAATCCTTATTCTTGTTGAGCTTTTGGGTCATGGGAGTGATGAAGTAAAAGAGATTGTTTCTGTGGCATTTGCCCGGATAAGCTATGATGAAGGTAGTAGAATGGCCCTTGCTAATGCTGGGGCAATCCCAATTTTTGTTGAATTGTTAGATCACGACATGGAGGAAATAAGAAATAATGTTGTAGAGGCTCTTTCCAATTTTCATGAAGATCCGTTATACCGTGATAGATTATCTGTTGTAGTTAATAATCCTTCATTCAGAGATATGCAGAATAGACTAATTCGTATTCGTGCATCGAACGAGCATATGACTAGATCTATACGTAGAACGAGTGTTGACCAACTCATTTGGAACCTGGATCATGTTTAA 1404 0.4031 MEGGASSKTENISWEVELKKCKNVIASGTKSMKIKAILMLANHSKQSPEHVLSSFITILIEILVRNIATDFVPDLLQEAVVYCLKCIACRGDGSLAIEMGEHGVAYALIRLLACVEGKMQKVVIKCLLVVVSFCDTSRTVVAASGGLEIIISLLNTCSNDVRLYLLEILSALALQREVRKGLIRLGALRFIVEAAGVGSMISRERACQSIGLVGVSRQARRTLVELGVLPVLVELFRVGDNTTKLVAGNTLGVISNHVDCIRPVAEAGAIPLYAELLEGSDDSKEIAKEVFCILAVAEANTVEIVGHLMRILREGDDEAKVAAAHVIWDISAYMHTTSVLRASGAILILVELLGHGSDEVKEIVSVAFARISYDEGSRMALANAGAIPIFVELLDHDMEEIRNNVVEALSNFHEDPLYRDRLSVVVNNPSFRDMQNRLIRIRASNEHMTRSIRRTSVDQLIWNLDHV* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g3568 467 Coils Coil 391 411 - -
Mal2g3568 467 PANTHER U BOX DOMAIN-CONTAINING 4 462 - -
Mal2g3568 467 SUPERFAMILY ARM repeat 60 414 IPR016024 -
Mal2g3568 467 Gene3D - 298 423 IPR011989 -
Mal2g3568 467 Gene3D - 18 297 IPR011989 -
Mal2g3568 467 Pfam Armadillo/beta-catenin-like repeat 377 411 IPR000225 GO:0005515
Mal2g3568 467 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 10-LIKE 4 462 - -
Mal2g3568 467 SMART arm_5 257 296 IPR000225 GO:0005515
Mal2g3568 467 SMART arm_5 374 414 IPR000225 GO:0005515
Mal2g3568 467 SMART arm_5 333 373 IPR000225 GO:0005515
Mal2g3568 467 SMART arm_5 134 174 IPR000225 GO:0005515
Mal2g3568 467 SMART arm_5 216 256 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g3568 Mal-Chr2 55576168 55577571 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g3568 264 410 U-box Gene Family AT1G71020 30.968 1.37e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g3568 - - cam:101502901 608.986