Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g3566 ATGGAAGGGGGTGAAACTAGTAAAATGGCAAACCTTAATAAGGAAGTTGCACTAAAGGATTGTGAAAATGTTATAGCTTCAGGAACCAAATCTATGAAAATTAAAGCTATTCTCATGCTAGCAGATTACTCTAAACAAGCCCCGGAACATGTATTGTCTAGCTTCATACCAAGTGTCATCGAGATTCTTGCTCGTAACATTGTAAATGATTCTGTTTCTGATTTACTTCAAGAGGCTACTGTTTCTTGCTTGAAGTGCATTGCCTGCAGAGGTGATGGTAGTTTGGCAATTGAAATGGGTGAACATGGTGTTGCACATTCTTTGATAAAGTTGTTGCCTCGTGCCGAGGGAAAGATGCAAAAAGTAGTGATAGAATGTTTGTTGGTTGTTGTAAGTTTTTGTGAGACAAGTAGGACAGTTGTTGCAACTAATGGTGGATTAGAAATTATCATATGTTTGTTGAATTCTTGCGATACCGATGTTAGATTGCATTTGTTAGAGATTTTGAGTGTGTTGGCGCTTGAGAGAGAAGGTAGGAAGGAACTCATTAGATTAGGAGCTCTTTGTTTTATTGTTGAGGCTGTTGGGGTTGGTAGCATGATTTCGAGGGAAAGGGCATGTGAATCGATTCGATTGCTTGGAGTTTCGATACAAGTTTGGCGCACACTTGTTGGATTGGGAGTGATACCTGTGCTAGTGGAGTTGTTACGTGTTGGAGATAACGCTACAAAACTTGTAGCTGGTAATACTCTTGCTGTGGTATCGACTTATGTCGAGTTCCTTATACCTGTTGCTGAAGCTGGGGCTATACCTCTTTACGCTGAGCTTCTTGAAGGATCCGATGATTCTGGTAAGGAGATAGCCAAGGAAGTGTTTTCGGTATTGGCTGTTGCAGAGGCCAATGATGTTGAAATTGTTGGTCACTTGGTGAGAATTCTTAGAGAAGGTGATGATGAAGCTAAACTAGCAGTTGCTCATGTGATATGGGATCTGTCGGCATACGAGCACACAACTTCTGTGCTTCGGGATTCAGGTGCAATCCTTATTCTTGTTGAGCTTTTGGGTCATGGCACTGATGATGAATTTAAAGAGATGGTTTCTGGGGCATTTGCTCAGATAAGCTACAATGAAGGTGGTAGAATGGTCCTTGCTGATGCCGGGGCAATCCCAATTCTTGTTGAATTGTTAGATCATGACATGGAGGAAATAAGAAAAAATGCTGTTGAGGCTCTTTCCAATTTTCATGAAGATCCGTTATACCGTGATAGATTATCTGATGTAGTTGATGCTCCTTTGTTCCGATGTATGCAGAATAGACTTATTCGTATTCGCGCATCAAACGGGCATATGACTAGATCTTTATATAGAATGAGTGTTCAGCAACTCATTCGGAACCTGAATGATGTCTATCGTCTTACAGGTATGTTGTGA 1431 0.4095 MEGGETSKMANLNKEVALKDCENVIASGTKSMKIKAILMLADYSKQAPEHVLSSFIPSVIEILARNIVNDSVSDLLQEATVSCLKCIACRGDGSLAIEMGEHGVAHSLIKLLPRAEGKMQKVVIECLLVVVSFCETSRTVVATNGGLEIIICLLNSCDTDVRLHLLEILSVLALEREGRKELIRLGALCFIVEAVGVGSMISRERACESIRLLGVSIQVWRTLVGLGVIPVLVELLRVGDNATKLVAGNTLAVVSTYVEFLIPVAEAGAIPLYAELLEGSDDSGKEIAKEVFSVLAVAEANDVEIVGHLVRILREGDDEAKLAVAHVIWDLSAYEHTTSVLRDSGAILILVELLGHGTDDEFKEMVSGAFAQISYNEGGRMVLADAGAIPILVELLDHDMEEIRKNAVEALSNFHEDPLYRDRLSDVVDAPLFRCMQNRLIRIRASNGHMTRSLYRMSVQQLIRNLNDVYRLTGML* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g3566 476 PANTHER U BOX DOMAIN-CONTAINING 4 464 - -
Mal2g3566 476 Gene3D - 13 261 IPR011989 -
Mal2g3566 476 SMART arm_5 293 333 IPR000225 GO:0005515
Mal2g3566 476 SMART arm_5 92 132 IPR000225 GO:0005515
Mal2g3566 476 SMART arm_5 334 375 IPR000225 GO:0005515
Mal2g3566 476 SMART arm_5 134 174 IPR000225 GO:0005515
Mal2g3566 476 SMART arm_5 376 416 IPR000225 GO:0005515
Mal2g3566 476 SMART arm_5 216 256 IPR000225 GO:0005515
Mal2g3566 476 Gene3D - 264 453 IPR011989 -
Mal2g3566 476 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 387 414 IPR000225 GO:0005515
Mal2g3566 476 SUPERFAMILY ARM repeat 16 297 IPR016024 -
Mal2g3566 476 Pfam Armadillo/beta-catenin-like repeat 377 413 IPR000225 GO:0005515
Mal2g3566 476 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 10-LIKE 4 464 - -
Mal2g3566 476 SUPERFAMILY ARM repeat 222 435 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g3566 Mal-Chr2 55551753 55553183 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g3566 262 396 U-box Gene Family AT3G46510 32.143 1.71e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g3566 - - cam:101502901 597.045