Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g3519 ATGGCAGTTTCTTCTCTCTCAGCAACATTCATTCCTTCTCTTTCTCTCTCCTCCAATTCTTCACCTTCATTATTGTCAAAGCCAAAGCTTCAATCTCTATGCTTTTTCTCCGGTAACACGTTGAGAATTACAAACGCAAAATCACTTCAATTATCTACTGTTGTTCATGCTGCTCCTGAAGTTTTGAATTCTGAGGTTGATGACTTGGAGACTCCAATTGGTGCTGATGCAGACATGATGTCACCAAAGCAGAAAATCAGAATCAAGCTTAGATCTTTCTCGGTCCCCTTGATAGAGGATTCCTGCAAGCAGATATTGGACGCAGCAAGAACCACCAATGCAAAAACAATGGGTCCTGTTCCTTTACCAACCAAGAAGCGAGTTTACTGTATCCTTAGATCTCCTCATGTAAACAAGGATGCTCGGTTCCATTTCGAGATCAGAACTCATCAGCGTGTCATTGATATTCTCTTTCCTACTGCTCAAACAATAGATTCTCTTATGCAACTTGATCTTCCTGGTGCTGTTGATGTCGAAGTCAAGCTCTAA 549 0.4135 MAVSSLSATFIPSLSLSSNSSPSLLSKPKLQSLCFFSGNTLRITNAKSLQLSTVVHAAPEVLNSEVDDLETPIGADADMMSPKQKIRIKLRSFSVPLIEDSCKQILDAARTTNAKTMGPVPLPTKKRVYCILRSPHVNKDARFHFEIRTHQRVIDILFPTAQTIDSLMQLDLPGAVDVEVKL* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g3519 182 PANTHER 30S RIBOSOMAL PROTEIN S10 FAMILY MEMBER 1 182 IPR001848 GO:0003735|GO:0005840|GO:0006412
Mal2g3519 182 Hamap 30S ribosomal protein S10 [rpsJ]. 83 182 IPR001848 GO:0003735|GO:0005840|GO:0006412
Mal2g3519 182 Gene3D Ribosomal protein S10 domain 75 182 IPR036838 -
Mal2g3519 182 TIGRFAM rpsJ_bact: ribosomal protein uS10 84 181 IPR001848 GO:0003735|GO:0005840|GO:0006412
Mal2g3519 182 Pfam Ribosomal protein S10p/S20e 87 181 IPR027486 -
Mal2g3519 182 SUPERFAMILY Ribosomal protein S10 85 182 IPR036838 -
Mal2g3519 182 ProSitePatterns Ribosomal protein S10 signature. 109 124 IPR018268 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Mal2g3519 182 PANTHER BNAC05G40270D PROTEIN 1 182 - -
Mal2g3519 182 SMART Ribosomal_S10_2 87 181 IPR027486 -
Mal2g3519 182 PRINTS Ribosomal protein S10 family signature 85 98 IPR001848 GO:0003735|GO:0005840|GO:0006412
Mal2g3519 182 PRINTS Ribosomal protein S10 family signature 141 155 IPR001848 GO:0003735|GO:0005840|GO:0006412
Mal2g3519 182 PRINTS Ribosomal protein S10 family signature 120 135 IPR001848 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g3519 84 182 Cytoplasmic Ribosomal Protein Gene Family AT3G47370 31.000 3.11e-08 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g3519 K02946 - gmx:100306286 242.662