Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g3504 ATGAATAAGAGTACTTCCACTTACGTACAACCAAATCAGTGGGTACCAAAATGTGAAGATGAATTAAAGCCTAAGCTGGGGCAACTATTTGATACTTTAAAGGAAGGTGAACTATTTTATAAAAATTATGCACATACCGTTGGATTTAGTGTGCGTTCTTCATCAGCAACGAAAGATAAAAATGGTGTGGCGCGTTGGAAGTATTTTGTATGCTCGAAAGAAGGTTATTTACCAAACAAGACAACACATGTGGAGCAAAGTGAATCAACCGTCAAGACTAGAAGAAGGAGTCTTACAAGAGAAGGATGCAATGCAAAAGTTGTTTTCAAACTGACAGAAGAAGGTAAACAGGAGCTTATTCGATTTCATGAAATCCATACACATCCACTTGCTTCTCCCACGAAAAAACAATTTCTAAGATCATTTAGAAAAGTGAATCCTGTTCACAAGAGTTTATTGCATGCATATAGTAGAGCCAATGTTGGGCCTTCAAAAACATACCATTTATTGAAAGAGCAAGTTGGGGGTTATGAAAATGTTGGGTGCACACAGAGAGATCTCCAAAATTACTCGAGAGATTTAAAAACTTTGAATAAAGAATCTGATGCACATGTTTTTATTGATAACTTTAGAAGGAAGCAAGAAGTTGATCCATCATTCTATTATGCATATCAGTTAGATGCTGAAGGGCATCTAAAGCATGCTTTTTGGGCAGATGGTATTTGTAGGAAAAATTATTCTTTGTTTGGGGATGTTGTTTCGTTTGATACTACATATCGAACAAATAAATATTCCTTGATTTTTGCACCTTTTACGGGAGTAAACCATCATAGACAATGTATTACTTTTGGAGCAGGGTTTTTAGCAAATGAGAAAGTTGAATCATTTATATGGTTGTTTGAAAAGTTTTTGGAAGCAGTGGGAGGAAATAAACCAATTCTTCTAATAACTGATCAGGATCCTGCCATGAAAGTTGCTATAGAAAATATTTTTACATCTTCTATTCATAGATTTTGTATGTGGCACATTATGAAAAAAGTTTCTGAAAAGGTAGGTTCTTCTTTGAATGATAACGAGGATTTCAACAATAGTTTGAAGTCGTGCGTTTGGAGTTCAGAGACACCAAATGATTTTGAAGAATCATGGCAATCTATAATCACTAGGTTTGAATTAGAAAATAATGGTTGGTTGTCACATATGTTTGATCTTCGTAGCATGTGGATCCCAGCTTACTTTAAGGATATTCTTTTGGCTGGGATATTGAGGACAACATCAAGATCAGAAAGTGAGAATTCTTTTTATGGTAATTTCTTGAACCCTAATATTAGCTTGGTTGAATTTTGGATGAGGTTTGATTCTGCATTAGAAGCCCAAAGACATAAGGAGTTACTTGCTGATAATAATTCACTTCATTCTATGCCAAAACTAATATTGGATCGTGGTTTAGAGCGGCATGCAAGAGATGTTTATACTCATGAGAACTTTTATATCTTTCAAAAAGAATTATGGGCTGCTTGTCTAGATTGTGGAATTGAAGATAAGAAAGAGGAAAATGGAGTTGAAATATTGCAAATAATTGATAACAGTGATGTTCATGGCAAACTTCGAGAAGTGGTTTACAATTTGTTTGATAACAATGCAAATTGCTCTTGCAAAATGTTTGAGGCTCAAGGCATACCTTGTAGACACATACTTTGTGTTGCAAAAGGAAAAGGTTTAAGTGAAATACCAAGTGTGTACATCATGAACAGGTGGACTAAGTCTGCAAATAGAAAACCTATTTTTGATTTAGGTGGCAATGTCTTGGAAATGTGTTCTAAAGCACAGAAGGATAACAAGCTCATTTCAGATGTGTGGGATCAATTACGTATGTGTGTGGAAAAGGCTGGGCATGACAAGGAAAAATTGACTTTTGTGTTGAATGGAGCTATTAACATGGTAAAGCAATTGGATGTTTTTGAAGGGGGTTCTAAGCAAACCAAAGTAGATGATTTTCAAGCCTTTACCGGGTCCATTATCCCTGAGGAAATCGAAATTCTCCCCCCAAAATGTTCAAAAACTAAAGGTAGTGCTAAAAGAATCAAAAGTGGTAAAGAGAAGGCCGTTGAACAACAACAAAAAAGAACAAGACTTTGTAAATCATGTTGCGAATATGCACATCACGATAGCCGCAATTGTCCTAAAAAGAACAAGACTTAG 2199 0.3543 MNKSTSTYVQPNQWVPKCEDELKPKLGQLFDTLKEGELFYKNYAHTVGFSVRSSSATKDKNGVARWKYFVCSKEGYLPNKTTHVEQSESTVKTRRRSLTREGCNAKVVFKLTEEGKQELIRFHEIHTHPLASPTKKQFLRSFRKVNPVHKSLLHAYSRANVGPSKTYHLLKEQVGGYENVGCTQRDLQNYSRDLKTLNKESDAHVFIDNFRRKQEVDPSFYYAYQLDAEGHLKHAFWADGICRKNYSLFGDVVSFDTTYRTNKYSLIFAPFTGVNHHRQCITFGAGFLANEKVESFIWLFEKFLEAVGGNKPILLITDQDPAMKVAIENIFTSSIHRFCMWHIMKKVSEKVGSSLNDNEDFNNSLKSCVWSSETPNDFEESWQSIITRFELENNGWLSHMFDLRSMWIPAYFKDILLAGILRTTSRSESENSFYGNFLNPNISLVEFWMRFDSALEAQRHKELLADNNSLHSMPKLILDRGLERHARDVYTHENFYIFQKELWAACLDCGIEDKKEENGVEILQIIDNSDVHGKLREVVYNLFDNNANCSCKMFEAQGIPCRHILCVAKGKGLSEIPSVYIMNRWTKSANRKPIFDLGGNVLEMCSKAQKDNKLISDVWDQLRMCVEKAGHDKEKLTFVLNGAINMVKQLDVFEGGSKQTKVDDFQAFTGSIIPEEIEILPPKCSKTKGSAKRIKSGKEKAVEQQQKRTRLCKSCCEYAHHDSRNCPKKNKT* 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g3504 732 SMART 26again6 547 574 IPR006564 GO:0008270
Mal2g3504 732 Pfam SWIM zinc finger 545 567 IPR007527 GO:0008270
Mal2g3504 732 Pfam FAR1 DNA-binding domain 39 131 IPR004330 -
Mal2g3504 732 Coils Coil 180 200 - -
Mal2g3504 732 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 194 636 - -
Mal2g3504 732 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 15 147 - -
Mal2g3504 732 ProSiteProfiles Zinc finger SWIM-type profile. 536 572 IPR007527 GO:0008270
Mal2g3504 732 Pfam MULE transposase domain 252 346 IPR018289 -
Mal2g3504 732 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 194 636 IPR031052 GO:0006355
Mal2g3504 732 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 15 147 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g3504 Mal-Chr2 53791063 53793576 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal2g3504 MULE 6.2e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g3504 - - soe:110798711 847.81