Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g3491 ATGGCGGACTCCGACAACGATTCCGGCGGTCCACACGGCGGCGGATCAAACGCACACGGAAGCGAGATGTCACCACGAGAACAAGACCGATTCCTACCAATCGCAAACGTAAGCAGGATCATGAAAAAAGCACTTCCAGCGAACGCGAAGATCTCAAAAGACGCAAAGGAAACAGTTCAAGAGTGTGTTTCAGAGTTCATCAGCTTCATTACCGGCGAAGCCTCCGACAAGTGTCAACGTGAGAAAAGGAAGACGATCAACGGCGACGATTTGCTTTGGGCGATGACGACGCTTGGATTTGAAGAGTATGTTGAGCCGTTGAAAGGTTATCTTCAGAGGTTTAGGGAGATGGAAGGAGAGAAAACGGTGGTGGCGCGTGATAAAGACGCGCCTCAAGGTTCTAATAGTGTTAATAATAGTTCTTTTGAGAGTGGTAGTTATGGTGGTGGTGGAATTATGATGCATCAGGGACACGTGTATGGTTCTGGTGGTGGTGGTTTTCATCAAGTTATGGGTAAGGGTGGGCCTGGGTATCCTGGGCCTGGGTCTAATTCTGGTAGGCCCAGATAG 570 0.4947 MADSDNDSGGPHGGGSNAHGSEMSPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKGYLQRFREMEGEKTVVARDKDAPQGSNSVNNSSFESGSYGGGGIMMHQGHVYGSGGGGFHQVMGKGGPGYPGPGSNSGRPR* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g3491 189 MobiDBLite consensus disorder prediction 129 143 - -
Mal2g3491 189 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 31 95 IPR003958 -
Mal2g3491 189 MobiDBLite consensus disorder prediction 123 143 - -
Mal2g3491 189 PRINTS CCAAT-binding transcription factor subunit A signature 78 96 - -
Mal2g3491 189 PRINTS CCAAT-binding transcription factor subunit A signature 97 115 - -
Mal2g3491 189 PRINTS CCAAT-binding transcription factor subunit A signature 59 77 - -
Mal2g3491 189 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-2 1 158 - -
Mal2g3491 189 MobiDBLite consensus disorder prediction 164 189 - -
Mal2g3491 189 Gene3D Histone, subunit A 18 143 IPR009072 GO:0046982
Mal2g3491 189 ProSitePatterns NF-YB/HAP3 subunit signature. 62 78 IPR003956 GO:0005634|GO:0006355|GO:0043565
Mal2g3491 189 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 1 158 IPR027113 GO:0001228|GO:0006355|GO:0016602
Mal2g3491 189 MobiDBLite consensus disorder prediction 1 29 - -
Mal2g3491 189 SUPERFAMILY Histone-fold 28 131 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g3491 Mal-Chr2 53127813 53128382 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g3491 1 156 CCAAT-HAP3 Transcription Factor Family AT4G14540 73.913 1.07e-73 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Mal2g3491 CBFD_NFYB_HMF 1.7e-27 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g3491 K08065 - gmx:100813580 246.128