Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g3481 ATGTTGCATCAAATTGGTGTCTCTGCTGATACAGGAGCTCCAACAAGTATAATGAATCCAACCAATGATGTCATTGTGCCCCAACTAGCTATTCGAGACAAAAATGCATTGCCAATAAAAAATGTAGCAAATATCATGAGAAAAGGTCTGCCACCAAACACAAAAATATCTCATGATGCAAAGGAGTTCGTTGAACAAATCACCTCAAAGTTCATAAGATTTGTAACCAAAAAAGCAAATGAGTGTTGCCAAAGCGAGTCCAGAAGAATTTTGGGTGCGGATGACCTACTGTGGGCCATGAAAACTCTAGGTTTTAATAACTACTATGAGTATCTCAATTTTTATCTCAAATGCTACCGTTATAGCAATGAGAATGGATCTATGCAACTAGTTGGTGAGATTCCTAATCCCATCTTACCAACTTTTCAGATTTCTCATCCCACCTTGCCACCACCGCTGTCCATTGAAACTCAGCCAAGCTTTTCCATTAATCCAAACCCATTTATGGAACTGGATGAAGCAATGGACATGGATGAGGTTTGGGCTGAATTGAATAATTTGGGTGTTGGTTCCCCCAGAGACTGCTTCAACCAACCTTGA 600 0.4 MLHQIGVSADTGAPTSIMNPTNDVIVPQLAIRDKNALPIKNVANIMRKGLPPNTKISHDAKEFVEQITSKFIRFVTKKANECCQSESRRILGADDLLWAMKTLGFNNYYEYLNFYLKCYRYSNENGSMQLVGEIPNPILPTFQISHPTLPPPLSIETQPSFSINPNPFMELDEAMDMDEVWAELNNLGVGSPRDCFNQP* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g3481 199 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 37 100 IPR003958 -
Mal2g3481 199 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-6 30 138 - -
Mal2g3481 199 Gene3D Histone, subunit A 30 130 IPR009072 GO:0046982
Mal2g3481 199 PRINTS CCAAT-binding transcription factor subunit A signature 83 101 - -
Mal2g3481 199 PRINTS CCAAT-binding transcription factor subunit A signature 102 120 - -
Mal2g3481 199 PRINTS CCAAT-binding transcription factor subunit A signature 64 82 - -
Mal2g3481 199 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 30 138 IPR027113 GO:0001228|GO:0006355|GO:0016602
Mal2g3481 199 SUPERFAMILY Histone-fold 35 122 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g3481 Mal-Chr2 53002659 53003258 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g3481 29 136 CCAAT-HAP3 Transcription Factor Family AT2G37060 46.789 2.28e-29 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Mal2g3481 CBFD_NFYB_HMF 1e-18 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g3481 K08065 - atr:18434917 98.9821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g3481 2 53002659 53003258 Mal8g0229 8 3520569 3521123 PCT