Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g3480 ATGTCTCCAATCATTATCATCATCACGCTCCTCTTCTTCCTCATTCCAACCACACTCTCACAGAACACAACCTTCAACTTCCCTTCTTTCACCCTCCGCAACATCACCCTCCTCGGTGACTCTTTCCTCCGCCGCGGCATCGTGGGTCTCACACGTTCCACCACCGTCCCTGCTTCCAGCTCCGGCACCCTCCTTTACAACAACCCCATTTCTCATATACCCAATTCATCTTTCTCTTTCAACACCAATTTCACTTTCTCTATCACTAACACGAACCCTCCTTCTTCCTCACTCAACCACTTCTCATTCTTCATCAACTCCACTACTAGTTTCATTTCTCTTGATTTTCACACTAACAATAACCAAGTTGGTTTTGATTTCAACAATAGTTCAATCCAAAAAACTGTTGATAATACCATTGTTTTCAATTTCACTAGTGGAAACTTAATCACTTCTTGGATTGACTATAATGGTTTCAACAAAAACTTGAGTGTTTTCTTAAGCTATGAAAATTCAAGTTTTTCAAGTACAAAGCCTGAAAAACCTGTTTTGTGTTTTGAGTTTGATCTTTCTGAGTATTTTAAGAAGATTGAGTTTCTTTTTGTGGGGTTTGTGGGTTCTGCTGAAGGAAGTACTGAGCTTCAACAAATCATGAATTGGAGCTTTGAGTCTTTTCAGTTTCTAGCTGTTAATCAAACTCAAAGTAAAAATTCAACCTTGCACCATTCAGGTTATGAAGTTGAAGATATTCCAGCTTCAAACTCAACAAAAAACCATCATAGAAAGAGATTTGTGATTGGTTTATGTGTTGCTATTGTTGGTCCATGTTTTTTCTTTGTTCTGCTTTTGGTTTTAGGGTATGTTTCTTATAGGAAATGGAGTAGTTTAAAGAAGCTTAAGAAGAGTGAAAGTTCTATGGGGTGCCCCAAAGAGTTTGGTTACAAGGAATTGAAGTTTGCTACAAAAGGGTTTCATAGTTCAAGGATAATTGGGAATGGTTCATTTGGGACAGTTTATAAGGCTTTGTTTGTTTCTTCTGGAACAGTTGCTGCTGTTAAAAGATCTAGACATTCACATGAAGGGAAAACCGAGTTTTTATCGGAGTTGTCGATTATAGCTGGTTTAAGGCACAAGAATTTAGTTCAACTTTTAGGTTGGTGTGTTGAGAAAGGTGAATTGTTGCTTGTGTATGAGTTTATGGTTAATGGTAGTTTAGATAAGTTTCTTCATAGAGAATTATCTCATGAGTGTGATATTTTGTTGAGTTGGGTTCAAAGATTTAACATTGTTGTTGGATTGGCTTCTGTTTTAGCTTATTTGCATCAAGAATGTGAACAAAGAGTGATTCATCGAGATATTAAGACGGCGAATATTTTGTTAGATGGAAATTTGAATCCAAGGTTAGGTGATTTTGGATTGGCAAAGCTTATGGATCATGATAAGAGTCCTGTTTCGACCTTAACGGCCGGAACAATGGGATACCTAGCTCCTGAGTATCTTCAATACGGTAAAGCAACCGATAAGACCGATGTTTTTAGCTTCGGAGTTGTTGTTCTTGAAGTTGCTTGTGGTAGAAGGCCAATTGAGAAAGAGGGTCAAGAAATGGTGAATTTGGTTGATTTTGTTTGGGGACTTTACTCTCAAGGGAAGTTAATTGAGGCTATTGATAAGAGATTGAATGGTGAGTTTGATGAGGTTGAAATGAAGAAGATGTTGCTATTAGGGTTGAGTTGTGCAAATCCAAATAGTGATGAAAGGCCTTCTATGAGAAGAGTTTTGCAAATTCTTAACAATGAAGCTTTGCCTCTTGTTGTACCTAAAGTGAAACCTTGCCTTAGTTTCTCTTCTGGATTGTTATTGAGTCTTGATGAGATTGTTTCAGATTTTGATGAAAGGTTTAGTTCTAATCAATTTAGTTGTAAGATCAAAATTGAACCAAGTTGA 1944 0.3729 MSPIIIIITLLFFLIPTTLSQNTTFNFPSFTLRNITLLGDSFLRRGIVGLTRSTTVPASSSGTLLYNNPISHIPNSSFSFNTNFTFSITNTNPPSSSLNHFSFFINSTTSFISLDFHTNNNQVGFDFNNSSIQKTVDNTIVFNFTSGNLITSWIDYNGFNKNLSVFLSYENSSFSSTKPEKPVLCFEFDLSEYFKKIEFLFVGFVGSAEGSTELQQIMNWSFESFQFLAVNQTQSKNSTLHHSGYEVEDIPASNSTKNHHRKRFVIGLCVAIVGPCFFFVLLLVLGYVSYRKWSSLKKLKKSESSMGCPKEFGYKELKFATKGFHSSRIIGNGSFGTVYKALFVSSGTVAAVKRSRHSHEGKTEFLSELSIIAGLRHKNLVQLLGWCVEKGELLLVYEFMVNGSLDKFLHRELSHECDILLSWVQRFNIVVGLASVLAYLHQECEQRVIHRDIKTANILLDGNLNPRLGDFGLAKLMDHDKSPVSTLTAGTMGYLAPEYLQYGKATDKTDVFSFGVVVLEVACGRRPIEKEGQEMVNLVDFVWGLYSQGKLIEAIDKRLNGEFDEVEMKKMLLLGLSCANPNSDERPSMRRVLQILNNEALPLVVPKVKPCLSFSSGLLLSLDEIVSDFDERFSSNQFSCKIKIEPS* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g3480 647 SUPERFAMILY Concanavalin A-like lectins/glucanases 23 227 IPR013320 -
Mal2g3480 647 Gene3D - 20 225 - -
Mal2g3480 647 CDD STKc_IRAK 330 598 - -
Mal2g3480 647 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
Mal2g3480 647 PANTHER - 21 628 - -
Mal2g3480 647 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.7-RELATED 21 628 - -
Mal2g3480 647 ProSitePatterns Protein kinases ATP-binding region signature. 330 353 IPR017441 GO:0005524
Mal2g3480 647 SMART serkin_6 324 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g3480 647 Pfam Protein kinase domain 324 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g3480 647 Gene3D Transferase(Phosphotransferase) domain 1 400 601 - -
Mal2g3480 647 ProSiteProfiles Protein kinase domain profile. 324 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g3480 647 Pfam Legume lectin domain 23 110 IPR001220 GO:0030246
Mal2g3480 647 Pfam Legume lectin domain 116 226 IPR001220 GO:0030246
Mal2g3480 647 Gene3D Phosphorylase Kinase; domain 1 288 399 - -
Mal2g3480 647 SUPERFAMILY Protein kinase-like (PK-like) 308 620 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g3480 Mal-Chr2 52958145 52960088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g3480 20 631 Receptor kinase-like Gene Family AT5G55830 55.183 0.0 656
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mal2g3480 Pkinase 7.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g3480 - - gmx:100808744 722.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g3480 2 52958145 52960088 Mal8g0221 8 3406564 3408594 PCT