Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g3441 ATGGTTACTGCTAAGTCAGCTGTTGATTTAATGGGATCTTCTTCTGAAGTTCATTTTTCTGGATTTCACATGGATGGTTTTGAGAAAAGAGAGGCTAGCATAGAACAACCAACAACATCAGCAGCTGATATGTACAACCAACCTTTCATCATAGGTGTTGCTGGTGGTGCAGCATCCGGCAAAAAAACAGTTTGTGATATGATTGTTCAGCAGCTTCATGACCAGCGAGTTGTGCTTGTTAATCAGGATTCTTTTTACAATAACTTGACTGAGGAGGAACGATCAAGAGTACAAGATTACAACTTTGACCATCCTGATGCTTTTGATACCGAGGAATTGCTTCGTGTTATGGACAAGTTGAAGCATGGTGAAGCTGTTGATATTCCAAAGTACAACTTCAAGAGTTACAAAAATGATGCGTTAAGAAGGGTTAACCCTTCAGATGTTATAATTTTGGAAGGCATCCTTGTTTTCCACGATCCACGTGTTCGGGAGTTGATGAATATGAAGATATTTGTTGACACAGATGCTGATGTTCGTTTGGCAAGGAGGATTAGGCGTGATACCAGCGAGAAGGATCGGGACATTGGAGCAATTCTTGATCAGTATTCAAAATTTGTGAAGCCAGCTTTTGATGACTTTATTCTTCCAACAAAGAAGTATGCTGATATAATTATACCTCGTGGAGGAGATAATCATGTCGCTGTTGATTTGATCGTTCAGCACATCCGCACAAAGCTTGGTCAACATGACCTGTGTAAAATATATCCAAATTTATATGTCATTCATTCGACTTTTCAGATACGGGGTATGCATACTCTGATACGTGATGCTCAGATAACGAAGCATGATTTTGTATTTTATTCTGATCGTTTGATTCGATTGGTTGTAGAACATGGTTTGGGACATCTTCCATTTACAGAAAAACAAGTAATCACTCCCACCGGTTCTGTATACACGGGTGTGGATTTTTGTAAGAGGTTGTGTGGTGTTTCTGTCATCAGAAGTGGGGAGAGTATGGAGAATGCCTTAAGAGCATGCTGTAAAGGTATTAAGATTGGGAAAATTCTGATTCACAGAGAAGGTGACAATGGTCAACAGCTAATATATGAAAAGTTGCCAAATGATATCTCAGAAAGGCATGTGTTACTGTTGGACCCTATCCTCGGCACAGGTAACTCGGCTGTACAAGCGATTTCTTTACTCATACAAAATAAATGA 1221 0.3956 MVTAKSAVDLMGSSSEVHFSGFHMDGFEKREASIEQPTTSAADMYNQPFIIGVAGGAASGKKTVCDMIVQQLHDQRVVLVNQDSFYNNLTEEERSRVQDYNFDHPDAFDTEELLRVMDKLKHGEAVDIPKYNFKSYKNDALRRVNPSDVIILEGILVFHDPRVRELMNMKIFVDTDADVRLARRIRRDTSEKDRDIGAILDQYSKFVKPAFDDFILPTKKYADIIIPRGGDNHVAVDLIVQHIRTKLGQHDLCKIYPNLYVIHSTFQIRGMHTLIRDAQITKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVITPTGSVYTGVDFCKRLCGVSVIRSGESMENALRACCKGIKIGKILIHREGDNGQQLIYEKLPNDISERHVLLLDPILGTGNSAVQAISLLIQNK* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g3441 406 CDD UMPK 50 246 IPR000764 -
Mal2g3441 406 Gene3D - 45 249 IPR027417 -
Mal2g3441 406 PRINTS Uridine kinase signature 48 65 - -
Mal2g3441 406 PRINTS Uridine kinase signature 192 203 - -
Mal2g3441 406 PRINTS Uridine kinase signature 123 138 - -
Mal2g3441 406 PRINTS Uridine kinase signature 178 188 - -
Mal2g3441 406 PRINTS Uridine kinase signature 214 227 - -
Mal2g3441 406 PRINTS Uridine kinase signature 78 89 - -
Mal2g3441 406 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 43 239 IPR027417 -
Mal2g3441 406 Pfam Uracil phosphoribosyltransferase 264 404 - -
Mal2g3441 406 TIGRFAM udk: uridine kinase 47 246 IPR000764 -
Mal2g3441 406 CDD PRTases_typeI 323 404 IPR000836 -
Mal2g3441 406 SUPERFAMILY PRTase-like 249 404 IPR029057 -
Mal2g3441 406 PANTHER URIDINE KINASE 16 404 - -
Mal2g3441 406 Gene3D - 250 406 IPR029057 -
Mal2g3441 406 Pfam Phosphoribulokinase / Uridine kinase family 50 234 IPR006083 GO:0005524|GO:0016301
Mal2g3441 406 PANTHER URIDINE KINASE 16 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g3441 Mal-Chr2 52149048 52154063 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g3441 4 403 PRT Gene Family AT4G26510 82.587 0.0 690
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g3441 K00876 - gmx:100527893 747.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g3441 2 52149048 52154063 Mal2g3441 2 52149048 52154063 ECH
Mal2g3441 2 52149048 52154063 Mal8g0178 8 2869406 2875131 PCT