Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g3440 ATGGATTTCCACAATATCTTATTAATCTGCAATGACTTTGGTGAGACAAAGGAACAACATGCTACTTTAAGGTATTTACTAATGGTTACTGCTAAGTCAGCTGTTGATTTAATGGGATCTTCTTCTGAAGTTCATTTTTCTGGATTTCACATGGATGGTTTTGAGAAAAGAGAGGCTAGCATAGAACAACCAACAACATCAGCAGCTGATATGTACAACCAACCTTTCATCATAGGTGTTGCTGGTGGTGCAGCATCCGGCAAAAAAACAGTTTGTGATATGATTGTTCAGCAGCTTCATGACCAGCGAGTTGTGCTTGTTAATCAGGATTCTTTTTACAATAACTTGACTGAGGAGGAACGATCAAGAGTACAAGATTACAACTTTGACCATCCTGATGCTTTTGATACCGAGGAATTGCTTCGTGTTATGGACAAGTTGAAGCATGGTGAAGCTGTTGATATTCCAAAGTACAACTTCAAGAGTTACAAAAATGATGCGTTAAGAAGGGTTAACCCTTCAGATGTTATAATTTTGGAAGGCATCCTTGTTTTCCACGATCCACGTGTTCGGGAGTTGATGAATATGAAGATATTTGTTGACACAGATGCTGATGTTCGTTTGGCAAGGAGGATTAGGCGTGATACCAGCGAGAAGGATCGGGACATTGGAGCAATTCTTGATCAGTATTCAAAATTTGTGAAGCCAGCTTTTGATGACTTTATTCTTCCAACAAAGAAGTATGCTGATATAATTATACCTCGTGGAGGAGATAATCATGTCGCTGTTGATTTGATCGTTCAGCACATCCGCACAAAGCTTGGTCAACATGACCTGTGTAAAATATATCCAAATTTATATGTCATTCATTCGACTTTTCAGATACGGGGTATGCATACTCTGATACGTGATGCTCAGATAACGAAGCATGATTTTGTATTTTATTCTGATCGTTTGATTCGATTGGTTGTAGAACATGGTTTGGGACATCTTCCATTTACAGAAAAACAAGTAATCACTCCCACCGGTTCTGTATACACGGGTGTGGATTTTTGTAAGAGGTTGTGTGGTGTTTCTGTCATCAGAAGTGGGGAGAGTATGGAGAATGCCTTAAGAGCATGCTGTAAAGGTATTAAGATTGGGAAAATTCTGATTCACAGAGAAGGTGACAATGGTCAACAGCTAATATATGAAAAGTTGCCAAATGATATCTCAGAAAGGCATGTGTTACTGTTGGACCCTATCCTCGGCACAGGTAACTCGGCTGTACAAGCGATTTCTTTACTCATACAAAAGGGTGTACCAGAGTCCAACATTATATTTCTTAATCTCATATCTGCTCCTAAAGGTGTACATGTGGTATGCAAAAGTTTTCCAAGAATTAAAATAGTGACATCTGAGATAGAGATTGGTTTGAATGAAGACTTCCGTGTCATACCGGGCATGGGCGAGTTTGGAGATCGGTACTTTGGAACAGATGATGATGAACAAGTAGTGGTTGCTTCACAGTAG 1512 0.3942 MDFHNILLICNDFGETKEQHATLRYLLMVTAKSAVDLMGSSSEVHFSGFHMDGFEKREASIEQPTTSAADMYNQPFIIGVAGGAASGKKTVCDMIVQQLHDQRVVLVNQDSFYNNLTEEERSRVQDYNFDHPDAFDTEELLRVMDKLKHGEAVDIPKYNFKSYKNDALRRVNPSDVIILEGILVFHDPRVRELMNMKIFVDTDADVRLARRIRRDTSEKDRDIGAILDQYSKFVKPAFDDFILPTKKYADIIIPRGGDNHVAVDLIVQHIRTKLGQHDLCKIYPNLYVIHSTFQIRGMHTLIRDAQITKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVITPTGSVYTGVDFCKRLCGVSVIRSGESMENALRACCKGIKIGKILIHREGDNGQQLIYEKLPNDISERHVLLLDPILGTGNSAVQAISLLIQKGVPESNIIFLNLISAPKGVHVVCKSFPRIKIVTSEIEIGLNEDFRVIPGMGEFGDRYFGTDDDEQVVVASQ* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g3440 503 CDD PRTases_typeI 350 465 IPR000836 -
Mal2g3440 503 Pfam Uracil phosphoribosyltransferase 291 492 - -
Mal2g3440 503 TIGRFAM udk: uridine kinase 74 273 IPR000764 -
Mal2g3440 503 Gene3D - 277 492 IPR029057 -
Mal2g3440 503 Gene3D - 72 276 IPR027417 -
Mal2g3440 503 PRINTS Uridine kinase signature 219 230 - -
Mal2g3440 503 PRINTS Uridine kinase signature 150 165 - -
Mal2g3440 503 PRINTS Uridine kinase signature 105 116 - -
Mal2g3440 503 PRINTS Uridine kinase signature 205 215 - -
Mal2g3440 503 PRINTS Uridine kinase signature 75 92 - -
Mal2g3440 503 PRINTS Uridine kinase signature 241 254 - -
Mal2g3440 503 SUPERFAMILY PRTase-like 276 493 IPR029057 -
Mal2g3440 503 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 70 266 IPR027417 -
Mal2g3440 503 CDD UMPK 77 273 IPR000764 -
Mal2g3440 503 PANTHER URIDINE KINASE 43 494 - -
Mal2g3440 503 Pfam Phosphoribulokinase / Uridine kinase family 77 261 IPR006083 GO:0005524|GO:0016301
Mal2g3440 503 PANTHER URIDINE KINASE 43 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g3440 Mal-Chr2 52138858 52144586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g3440 31 495 PRT Gene Family AT4G26510 83.512 0.0 810
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g3440 K00876 - gmx:100527893 884.404