Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g3436 ATGAGTGATTCTCTTTACAAAGTTGATACAACTCCACGTCTTGCTCAATGGAGAATCGAAAACTTGGCTTCTTGTACTTATCGCAAATCAGATCCTTTCAAGATTGGAAACTGGAATTGGTATTTGTCGGTGGAGAAGCACAAGGTTGTGTTTGTTAAATTGTTTCCTGAAATATCCAATGTAACAAGAGACAATCCTCCAATTGCTTCTTTTATCATGCGTGTGGTTAGTTCTGCTCTTGGAAATCGCAAAGCTCTCACACATCCAGAGATAAAGGACAAAGTGATCAAGAGCAATGAAGATTTTGTTTGGTCAATTGAGGTTCCACTGTCTGGAAAATTCATCATTGATGTTGATTTCCTTGATTTGAAGATTGCATGCCCAGATGGTGGAGAACCTTGCTCCATATGGGGTGGTGAAGGATTTACTCAGGAGAGATCAAATGCAAAAGCCCTAGGGTCTCTTGGTAGAATGCTAAAAGAAGGCATTCACACAGACATCACAATCAATGCTTCTGATGGAAGTATAGGAGTTCATAGAGCTCTTCTTGCTGCTAGGTCACCTGTCTTCCAAAGCATGTTTTCACACGATCTTAAAGAGAAAGAGTTGTCAACCATAAACATCACAGACATGTCGATCGAAGCATGTCAGGCTTTTCTCAATTATCTTTACGGGATCATCAAAAATGAAGAATTTCTGACACATAGGCTAGCCCTTCTGCATGCAGCGGACAAGTACGACATATCTGACTTGAGAGAGGCCATACATGAGAGTCTTTTAGAAGATATTGATACAAAAAATGTACTTGAAAGGCTTCAAAATGCATCACTATATAGGTTGACGAAACTGAAGACGAGCTGTATCCAGTATCTTGTTAAATTTGGTAAAATATTTGAAATTCGGGATGATTTCAATATGTTCCTCCAAAATGCGGACAGGGATCTCATCGCTGAAGTCTTCGAGGAAGTTCTAGGTGCCTGGAAAGGATATTGA 993 0.3978 MSDSLYKVDTTPRLAQWRIENLASCTYRKSDPFKIGNWNWYLSVEKHKVVFVKLFPEISNVTRDNPPIASFIMRVVSSALGNRKALTHPEIKDKVIKSNEDFVWSIEVPLSGKFIIDVDFLDLKIACPDGGEPCSIWGGEGFTQERSNAKALGSLGRMLKEGIHTDITINASDGSIGVHRALLAARSPVFQSMFSHDLKEKELSTINITDMSIEACQAFLNYLYGIIKNEEFLTHRLALLHAADKYDISDLREAIHESLLEDIDTKNVLERLQNASLYRLTKLKTSCIQYLVKFGKIFEIRDDFNMFLQNADRDLIAEVFEEVLGAWKGY* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g3436 330 SUPERFAMILY POZ domain 150 261 IPR011333 -
Mal2g3436 330 SMART BTB_4 165 263 IPR000210 GO:0005515
Mal2g3436 330 CDD BTB_POZ_ZBTB_KLHL-like 164 246 - -
Mal2g3436 330 Pfam BTB/POZ domain 157 261 IPR000210 GO:0005515
Mal2g3436 330 PANTHER OS08G0495500 PROTEIN-RELATED 1 330 IPR044714 -
Mal2g3436 330 ProSiteProfiles BTB domain profile. 165 224 IPR000210 GO:0005515
Mal2g3436 330 PANTHER OS08G0495500 PROTEIN 1 330 - -
Mal2g3436 330 Gene3D Potassium Channel Kv1.1; Chain A 143 293 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g3436 Mal-Chr2 52096620 52099001 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Mal2g3436 BTB 1.5e-20 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g3436 K10523 - gmx:100790186 572.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g3436 2 52096620 52099001 Mal2g3436 2 52096620 52099001 ECH
Mal2g3436 2 52096620 52099001 Mal8g2038 8 42284849 42288860 PCT