Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g3423 ATGGCTAGAGGAAATTCTACCCTCCCCATCCATTTCTTCAAGATCATCCTCCAAGCTAATCTTCAAAGGCTTCAAATACCAAATAAGTTTACAAGGAGACATGGAGTTGGTCTATCAAATCCAGTGTTGATCAAACCTCCTGATGGCACTAAATGGAAAGTTTATTGGAAAAAAATCAATGGTGAGATTTGGTTTGGAAAGGGTTGGAAATCTTTTACTGAAAATTACTCTCTAGGACATGGGTGTTTGGTGGTGTTTAAATATAACGGATCTTCAAAGTTTGATGTACTCATACTTGGCCAGAATGCGGTTGAAATAGACTATGATTCTTCATGTGATATTGATGATGAAGATGACAATGTTGATTATAGTGATGATGAATCAGATGAGATTTTAGATGAATGGTTTAATCGGAAGAACGTTAGACAAAGGTCACCATTAGTTTCTCCTCGACCACATAAGAAAGTTAGAGGTGAGATTAAGAAGAGTGCTAAAAGAACTTCATCATTGAATTGGCCAAGAGGAGCTAGAGCTCAGAAAGTAGCTGAAAATTTCATCTCAACCAATCCTTTTTTCACAATTCTCATAAAGCCTAATCATCTGGCAGCAAATCGGCTGAATCTACCAAATTTTAAAGGGGTTATTGAGAATAAGAAGAAGAATGTAGTGCTTCAGATTGAAAAAAGATCATGGAATGTGAAATTGCTCTGTTGGTGCAAGCACACTAAGGGTCGCCGCCTATCGGCGGGTTGGTCGTTGTTTGCAAGTGAAAGTGGACTGCAATCAGGAAATGTTTGTGTCTTTGAACTGATAAACAAGCAAGATTTAGTTTTTAAAGTTCATGTTTTCTAA 852 0.3732 MARGNSTLPIHFFKIILQANLQRLQIPNKFTRRHGVGLSNPVLIKPPDGTKWKVYWKKINGEIWFGKGWKSFTENYSLGHGCLVVFKYNGSSKFDVLILGQNAVEIDYDSSCDIDDEDDNVDYSDDESDEILDEWFNRKNVRQRSPLVSPRPHKKVRGEIKKSAKRTSSLNWPRGARAQKVAENFISTNPFFTILIKPNHLAANRLNLPNFKGVIENKKKNVVLQIEKRSWNVKLLCWCKHTKGRRLSAGWSLFASESGLQSGNVCVFELINKQDLVFKVHVF* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g3423 283 CDD B3_DNA 11 99 IPR003340 GO:0003677
Mal2g3423 283 Gene3D - 7 103 IPR015300 -
Mal2g3423 283 ProSiteProfiles B3 DNA-binding domain profile. 191 283 IPR003340 GO:0003677
Mal2g3423 283 ProSiteProfiles B3 DNA-binding domain profile. 9 102 IPR003340 GO:0003677
Mal2g3423 283 SUPERFAMILY DNA-binding pseudobarrel domain 187 283 IPR015300 -
Mal2g3423 283 PANTHER TRANSCRIPTIONAL FACTOR FAMILY PROTEIN, PUTATIVE-RELATED 7 283 - -
Mal2g3423 283 PANTHER B3 DOMAIN-CONTAINING PROTEIN REM-LIKE 3-RELATED 7 283 IPR039218 -
Mal2g3423 283 SMART B3_2 191 281 IPR003340 GO:0003677
Mal2g3423 283 SMART B3_2 12 102 IPR003340 GO:0003677
Mal2g3423 283 Pfam B3 DNA binding domain 20 96 IPR003340 GO:0003677
Mal2g3423 283 Pfam B3 DNA binding domain 191 282 IPR003340 GO:0003677
Mal2g3423 283 SUPERFAMILY DNA-binding pseudobarrel domain 10 109 IPR015300 -
Mal2g3423 283 CDD B3_DNA 191 283 IPR003340 GO:0003677
Mal2g3423 283 Gene3D - 174 283 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g3423 Mal-Chr2 51673967 51675984 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g3423 8 283 B3 DNA Binding Superfamily AT3G18990 28.947 1.54e-33 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mal2g3423 B3 1.8e-11 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g3423 - - mtr:MTR_3g061330 354.755