Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g3422 ATGGTTAGAGGAAATTGTACCCTCCCCATCCGTTTCTTCAAGATCATCCTCCAAACTAATCTTCAAAGGATTAAAATACCAAATAAGTTTACAAGGAGACATGGAGTTGGTCTATCAAATCCAGTGTTGATCAAGCCACCTGATGGCACTAAATGGAAAGTTTATTGGAAAAAAATCAACGGTGAGATTTGGTTTGAAAAGGGTTGGAGAAATTTTACTCAAAATTACTCTTTAACACATGGATGTTTGGTGGTGTTTAAATATGAAGAAGGAACTTCAAAGTTCAATGTACTCATACTTGGCCAGAATGCGGTAGAAATAGACTATGATTCTTCATGTGACACTGATGATGAAAATGACAATGTTGATCATAGTAGTGATGATGAATCATTTGAGATGTTCGATGAATGGATTAATAGAAAGAAGGCTAGACAAAGATCACCATTGGTTTCTCCTCGACCACATAAGAAACTTAGAGGTGATCATGAGAAGACTACTAAAAGAACTACATCATTGAATTGCCCAAAAGGAGCTAGAGCTCAAGAAGTAGCTGCAAAATTCATCTCATGCAATCCTTTTTTCACAATTTTCATAAAACCTAATCATGTGGTAGATACTCAGCTGTATGTACCAAATTTAGAAGGGGTTATCGAGATCAAAGAGAAGTATGTGATTCTGCAGATTGGGAAAAGATCATGGAATGTGAAATTGATCTGTTCTAAATATGGTGGCTACCTATCAGCGGGTTGGTCCTTGTTTGCAAGCGAAAGTGAACTGCTACCAGGAGATGTTTGTGTCTTTGAACTGATAAACAAAAAGGATTTGGTTTTTAATGTTCATGTTTTCAAAAGTGACAGTTAA 861 0.3624 MVRGNCTLPIRFFKIILQTNLQRIKIPNKFTRRHGVGLSNPVLIKPPDGTKWKVYWKKINGEIWFEKGWRNFTQNYSLTHGCLVVFKYEEGTSKFNVLILGQNAVEIDYDSSCDTDDENDNVDHSSDDESFEMFDEWINRKKARQRSPLVSPRPHKKLRGDHEKTTKRTTSLNCPKGARAQEVAAKFISCNPFFTIFIKPNHVVDTQLYVPNLEGVIEIKEKYVILQIGKRSWNVKLICSKYGGYLSAGWSLFASESELLPGDVCVFELINKKDLVFNVHVFKSDS* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g3422 286 PANTHER B3 DOMAIN-CONTAINING PROTEIN REM-LIKE 3-RELATED 4 283 IPR039218 -
Mal2g3422 286 MobiDBLite consensus disorder prediction 154 169 - -
Mal2g3422 286 Gene3D - 175 285 IPR015300 -
Mal2g3422 286 Gene3D - 9 104 IPR015300 -
Mal2g3422 286 SMART B3_2 12 103 IPR003340 GO:0003677
Mal2g3422 286 SMART B3_2 193 285 IPR003340 GO:0003677
Mal2g3422 286 ProSiteProfiles B3 DNA-binding domain profile. 9 103 IPR003340 GO:0003677
Mal2g3422 286 PANTHER TRANSCRIPTIONAL FACTOR FAMILY PROTEIN, PUTATIVE-RELATED 4 283 - -
Mal2g3422 286 SUPERFAMILY DNA-binding pseudobarrel domain 190 285 IPR015300 -
Mal2g3422 286 CDD B3_DNA 11 100 IPR003340 GO:0003677
Mal2g3422 286 Pfam B3 DNA binding domain 193 284 IPR003340 GO:0003677
Mal2g3422 286 Pfam B3 DNA binding domain 19 99 IPR003340 GO:0003677
Mal2g3422 286 MobiDBLite consensus disorder prediction 143 172 - -
Mal2g3422 286 SUPERFAMILY DNA-binding pseudobarrel domain 11 110 IPR015300 -
Mal2g3422 286 CDD B3_DNA 193 283 IPR003340 GO:0003677
Mal2g3422 286 ProSiteProfiles B3 DNA-binding domain profile. 193 285 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g3422 Mal-Chr2 51651046 51653019 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g3422 8 283 B3 DNA Binding Superfamily AT3G18990 26.113 4.68e-31 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mal2g3422 B3 7.6e-11 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g3422 - - mtr:MTR_3g061330 377.481