Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g3421 ATGAATTGGCCAAAGGATGCTAGAGCTCAGGAAATAGCTGAAAATTTCATCTCATGCAATCCTTTTTTCACAATTCTCATTAAGCCAATTACTCTGTTAGAAAATCAACTGTCTATACCAGATCTAAAAGGGGTTATTGAGAACAAGGACAAGAATGTGATGATGCAGTTAGGGAAAAGATCATGGAATGTCAAATTACTCCGTTGTTACGAGGGAAAGCATAATCGTCGCCTTTCGGCCGGTTGGTCGTTGTTTGCAAGTGAAAGTGGACTGAAATCAGGAAATGTTTGTGTCTTTGAGCTGATAAACAAGAAAGATTTGGTTTTTAAAGTTCATCTTTTCTGA 345 0.3768 MNWPKDARAQEIAENFISCNPFFTILIKPITLLENQLSIPDLKGVIENKDKNVMMQLGKRSWNVKLLRCYEGKHNRRLSAGWSLFASESGLKSGNVCVFELINKKDLVFKVHLF* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g3421 114 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 5 114 - -
Mal2g3421 114 ProSiteProfiles B3 DNA-binding domain profile. 22 114 IPR003340 GO:0003677
Mal2g3421 114 SUPERFAMILY DNA-binding pseudobarrel domain 19 114 IPR015300 -
Mal2g3421 114 Pfam B3 DNA binding domain 22 113 IPR003340 GO:0003677
Mal2g3421 114 SMART B3_2 22 112 IPR003340 GO:0003677
Mal2g3421 114 Gene3D - 4 114 IPR015300 -
Mal2g3421 114 PANTHER B3 DOMAIN-CONTAINING 5 114 - -
Mal2g3421 114 CDD B3_DNA 22 114 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g3421 Mal-Chr2 51644879 51645356 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g3421 8 114 B3 DNA Binding Superfamily AT3G18990 32.456 4.39e-12 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mal2g3421 B3 2e-11 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g3421 - - ccaj:109795878 151.754