Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g3347 ATGAAGTGGGAAATGGAAATTCTTTCACCAAATTCTCACCCTCATGCACCATTTGTACAAAATTCCAACAGTACCAACAATTGGTTTTTGGAAGATTGTAGCAATAGCATTAACAGGAGCACAAAATGGACTCCTGCAGAGAACAAATTGTTTGAAAATTCTCTTGCAGTTTATGATAAGGATACGCCGGATCGGTGGCTTAAGGTAGCTGAAATGATACCTGGAAAGAGTGTTGTTGATGTGATGAATCAGTATAAGGAATTGGAAGTTGATGTTTGTAATATAGAAGCTGGTTTGGTGCCAATTCCTGGTTATAATACTACTGCTTCACCCTTTACTTTAGATTGGGTGAATTCTTCTGGTTATGATGGTTTTAGAGGAATTAGTGGAAAGAGGGGCTCTTCTGGTAGATCTCCTGATCAGGAAAGGAAGAAAGGTGTACCATGGACTGAAGAAGAACACAAATTATTTCTATTGGGTCTGAAAAAGTATGGAAAAGGTGATTGGAGAAACATATCAAGGAATTTTGTGATCACTAGGACACCAACACAAGTAGCTAGCCATGCTCAGAAATATTTCATCAGACAAATTTCAGGAGGCAAAGACAAAAGAAGAGCTAGCATCCATGACATAACAACAGTTAATCTCACAGAAACTTCTAGAACTTCTCCAACTTCAGAAGAAACCAAGAGATCCACTTCACCACAGATGAACATGAACAAGTATTCCACTGTTAACACCACTTCTGAGATGCATTTTCAGCCAGCTATGACAGCATTCAATCCTTCACATGAACAAGTTTTCATGTCTCCTTATGGAGTTAATAATAATAACTCTTATGGATTCAAAATGCAGGGTCAAAATATGCATAGAAATCCTCTTCATGAGTCTTCTTATTTTGGAACTCAGACACAAAACATGGTTTTCCAAATGCAATCTTCTCAACAACACTATTCACATGCATGA 966 0.3768 MKWEMEILSPNSHPHAPFVQNSNSTNNWFLEDCSNSINRSTKWTPAENKLFENSLAVYDKDTPDRWLKVAEMIPGKSVVDVMNQYKELEVDVCNIEAGLVPIPGYNTTASPFTLDWVNSSGYDGFRGISGKRGSSGRSPDQERKKGVPWTEEEHKLFLLGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQISGGKDKRRASIHDITTVNLTETSRTSPTSEETKRSTSPQMNMNKYSTVNTTSEMHFQPAMTAFNPSHEQVFMSPYGVNNNNSYGFKMQGQNMHRNPLHESSYFGTQTQNMVFQMQSSQQHYSHA* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g3347 321 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 141 197 IPR017930 -
Mal2g3347 321 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 290 IPR043363 -
Mal2g3347 321 SUPERFAMILY Homeodomain-like 143 196 IPR009057 -
Mal2g3347 321 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 144 196 IPR006447 GO:0003677
Mal2g3347 321 MobiDBLite consensus disorder prediction 128 147 - -
Mal2g3347 321 MobiDBLite consensus disorder prediction 217 240 - -
Mal2g3347 321 PANTHER MYB TRANSCRIPTION FACTOR MYB51 1 290 - -
Mal2g3347 321 ProSiteProfiles Myb-like domain profile. 141 193 IPR001005 -
Mal2g3347 321 Pfam Myb-like DNA-binding domain 148 193 IPR001005 -
Mal2g3347 321 SUPERFAMILY Homeodomain-like 35 89 IPR009057 -
Mal2g3347 321 ProSiteProfiles SANT domain profile. 149 197 IPR017884 -
Mal2g3347 321 Gene3D - 34 102 - -
Mal2g3347 321 Gene3D - 147 197 - -
Mal2g3347 321 CDD SANT 42 88 IPR001005 -
Mal2g3347 321 CDD SANT 148 193 IPR001005 -
Mal2g3347 321 SMART sant 145 195 IPR001005 -
Mal2g3347 321 SMART sant 39 91 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g3347 Mal-Chr2 50212009 50213507 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mal2g3347 Myb_DNA-binding 1.6e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g3347 - - cam:101514273 508.834
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g3347 2 50212009 50213507 Mal2g3347 2 50212009 50213507 ECH
Mal2g3347 2 50212009 50213507 Mal8g1171 8 18262409 18263963 ECH
Mal8g2050 8 42384291 42385919 Mal2g3347 2 50212009 50213507 ECH
Mal3g2200 3 90017519 90019273 Mal2g3347 2 50212009 50213507 ECH