Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g3325 ATGGCTTCTATTGCTACTTTCTTTAACAAACTTCACTCTCTTCTCATCCTCATTCTCCATCTTGGTTGCTTCATGTTCACCACCACCGTCGCCGCCACCGCCGGAAAACAAGACAACCATCATTTATTACCATCAAAGAAACGAAAAATCTCACCTTTATCACAACCCTCTTCTCCTTCCCACCCAAAATTCAAAACCCACAAAGCCATTTCTTCTTCTTGGCATTTCATCAAACACCTCTTCTGCAAAAATTCCTGCAAAACCGTAACCACCACTCCCACCACCCAATCATCACCTGAATGCACCACCGCAACCACCGCCAAATCCTCCACACAATCCCTTATCTCATTGGTTCAACCCGACCTGAATTTTCAAGATCCACCACGCAAGAAAAATGGATCGTGTCCCGAATCCGATATCTCCGCCGACAACAACCTCTTCTTCCCACTCCGCAACGACATCTTCCCATGCACCGCGTGCGGTGAGATTTTCCAGAAACCAAACCTCCTCGAAAATCACCAATCCACGAACCACGCCGTATCGGAGCTTATTGTATCCGACCCGGGTCACAACATCGTTCAAATCATATTCAAATCGGGTTGGCCTGAAACAAACAACTTCCCCAACATTCACCGAATCTTGAAGATCCACAACAGCCAGAAAATCCTCTCGAAATTTGAAGAATATCGCGAAACGGTGAAAAGTAAGGCGGCGCGTGGTGTCACGCGTCGCCGTGACGAACGTTGCATCGCCGACGGAAACGAGCTCATGCGTTTTCACTGCTCCACTTTTTTATGCGAGTTGGGACATAACGGGGATTCTTCAATTTGTTCTCAGCAATTTTGTAATATTTGTGGAATTATTAAATCGGGATTTTCGCCGAAATTAGATGGAATTTCCACGCTGTCGACTAGCTGGAGGGCACACGTGTCAATTCCTGATGACATCGAGCGGGAGTTTAAGTTCATGAACGTCAAACGAGCTATGCTCGTTTGTCGTGTTATTGCGGGTCGGATTGGATCGGATTTGGATGATGAGGTGGATAAAACCGATGGGGGTTTTGATTCAGTGATGGCGCGGGGCGAGAGCGGTGTTTACACACGCCTTGATGAGGAAGAGTTGATTGTTTTTAATCCTAGGGCTGTGCTTCCTTGCTTTGTGATTGTGTATAGTGTTTAA 1179 0.4656 MASIATFFNKLHSLLILILHLGCFMFTTTVAATAGKQDNHHLLPSKKRKISPLSQPSSPSHPKFKTHKAISSSWHFIKHLFCKNSCKTVTTTPTTQSSPECTTATTAKSSTQSLISLVQPDLNFQDPPRKKNGSCPESDISADNNLFFPLRNDIFPCTACGEIFQKPNLLENHQSTNHAVSELIVSDPGHNIVQIIFKSGWPETNNFPNIHRILKIHNSQKILSKFEEYRETVKSKAARGVTRRRDERCIADGNELMRFHCSTFLCELGHNGDSSICSQQFCNICGIIKSGFSPKLDGISTLSTSWRAHVSIPDDIEREFKFMNVKRAMLVCRVIAGRIGSDLDDEVDKTDGGFDSVMARGESGVYTRLDEEELIVFNPRAVLPCFVIVYSV* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g3325 392 ProSiteProfiles Zinc finger C2H2 type domain profile. 155 183 IPR013087 -
Mal2g3325 392 MobiDBLite consensus disorder prediction 50 65 - -
Mal2g3325 392 ProSitePatterns Zinc finger C2H2 type domain signature. 157 178 IPR013087 -
Mal2g3325 392 Gene3D - 181 391 - -
Mal2g3325 392 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 3 391 - -
Mal2g3325 392 SUPERFAMILY ADP-ribosylation 180 391 - -
Mal2g3325 392 MobiDBLite consensus disorder prediction 40 65 - -
Mal2g3325 392 PANTHER NUCLEIC ACID BINDING PROTEIN 3 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g3325 Mal-Chr2 49923958 49925136 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g3325 74 392 C2H2 Transcription Factor Family AT2G29660 55.623 3.16e-113 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal2g3325 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g3325 - - gmx:100785244 584.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g3325 2 49923958 49925136 Mal2g3325 2 49923958 49925136 ECH