Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g3318 ATGAAACCAATTGGAGCACGTATTGGTGGTGGTGATAATATAAAGATCACCAACCACTCTTCTATTGGTCCTCCTTTGACTGCCATTGACAGATTCTTATGGGGTCAACACAACCACTTCCCTCAAAAGAAACTTCAACAAAATGTTGATGATCAAAATATTTGTAGCTTTGGTTATTCGAATGCTTCAACCTATAGTTTTATGTGGCCTAATAATAATATCATGTCTCAAGAAGCTAGCTTTGTTGATCATCTATTGGCAAATGAAGAGGTGATGAATTGGACACAACAAATTCCTTCATTGTGTGTGGAAAAAGAAGACGCGATAACCGGTTTAGAGAAAGGTGCAAAAGTTGTTGGAAGAAGACCTAAGAAAGTGTCTTCTTTTTCTTTGATCAAAGGACAGTGGACTGATGAAGAAGACAGGAAATTGTTGAAGTTGGTGAAGCAATATGGTGTAAGAAAATGGTCTCAAATAGCTGAGAAGTTGGAAGGAAGAGCTGGAAAGCAGTGTAGGGAAAGATGGCATAATCATCTGAGGCCTGATATCAAAAAAGATAGCTGGAGTGAAGAAGAAGAGAGGATGCTAGTAGAAACTCATGGTAAGATCGGAAACCGTTGGGCGGAGATAGCAAAGAGAATTCCAGGAAGAACTGAGAATGCAATAAAGAATCATTGGAATGCAACAAAAAGGAGACAAAATTCAAGAAGAAAGAACAAAAGGCCTCAAACCACTGATGGTAAACCACAATCTTCTATTCTTCAAGATTACATCAAAACTTTGACTACTCAAAAAGCATCCACCACCACGACCACCACCACTACTACTACTGCTACTACTAGCTCCGCGTCAGCAATCTCTGAGGACCCTTCTTCAAACCAATCTTCCCTTGTTTTTTCTAACCTATCTCATGAAAATTCATCATCATCACTTATAGCTGAATCTTATGATGATGAACTTCTCTTCATGCAACAACTTTTCAAGGTGAATAATAATGCTGAACCAGTTAACCCCTACTCCAAGAAACACTCTTCAAACTCTTATTCATTGGAGTATTCTTCCCAAACTAACAGTAATCAGATTCTCCCTGATGTTACTGATTTTGGATTTGTTCAATCCAATTATCCTAAGCCAAATTCACATAACAACATGTGTGCTACTTCCACTCCTATGATGAATTACCTTAATTCTGATCTTTACTTTTCTCCAATGCTGAATGGAATTCAAAATGATCAGAGTAATGTGGAGTTGCAGCTTGGGAATATGAATTTTTCAGAGGGAAAGAGAGAGATGGATTTGTTGGAGTTGGTTTCTTCTGCTCAGTTTTATTAG 1332 0.3799 MKPIGARIGGGDNIKITNHSSIGPPLTAIDRFLWGQHNHFPQKKLQQNVDDQNICSFGYSNASTYSFMWPNNNIMSQEASFVDHLLANEEVMNWTQQIPSLCVEKEDAITGLEKGAKVVGRRPKKVSSFSLIKGQWTDEEDRKLLKLVKQYGVRKWSQIAEKLEGRAGKQCRERWHNHLRPDIKKDSWSEEEERMLVETHGKIGNRWAEIAKRIPGRTENAIKNHWNATKRRQNSRRKNKRPQTTDGKPQSSILQDYIKTLTTQKASTTTTTTTTTTATTSSASAISEDPSSNQSSLVFSNLSHENSSSSLIAESYDDELLFMQQLFKVNNNAEPVNPYSKKHSSNSYSLEYSSQTNSNQILPDVTDFGFVQSNYPKPNSHNNMCATSTPMMNYLNSDLYFSPMLNGIQNDQSNVELQLGNMNFSEGKREMDLLELVSSAQFY* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g3318 443 ProSiteProfiles Myb-like domain profile. 180 230 IPR001005 -
Mal2g3318 443 MobiDBLite consensus disorder prediction 265 296 - -
Mal2g3318 443 Gene3D - 186 257 - -
Mal2g3318 443 ProSiteProfiles Myb-like domain profile. 133 179 IPR001005 -
Mal2g3318 443 MobiDBLite consensus disorder prediction 216 253 - -
Mal2g3318 443 SMART sant 184 232 IPR001005 -
Mal2g3318 443 SMART sant 132 181 IPR001005 -
Mal2g3318 443 CDD SANT 187 230 IPR001005 -
Mal2g3318 443 Pfam Myb-like DNA-binding domain 136 196 - -
Mal2g3318 443 PANTHER MYB DOMAIN PROTEIN 64-RELATED 126 355 - -
Mal2g3318 443 Gene3D - 132 184 - -
Mal2g3318 443 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 184 234 IPR017930 -
Mal2g3318 443 CDD SANT 136 179 IPR001005 -
Mal2g3318 443 SUPERFAMILY Homeodomain-like 130 226 IPR009057 -
Mal2g3318 443 PANTHER MYB PROTEIN-RELATED 126 355 - -
Mal2g3318 443 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 128 183 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g3318 Mal-Chr2 49846218 49849409 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g3318 23 440 MYB Transcription Factor Family AT5G11050 38.053 8.67e-85 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal2g3318 Myb_DNA-bind_6 3.1e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g3318 K09422 - gmx:100786295 405.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g3318 2 49846218 49849409 Mal2g3318 2 49846218 49849409 ECH