Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g3305 ATGGGAAAGAGTTTGTTTCAAGAATCTCTGAAAGCTCTAGAAGCTGATATTCAGTATGCTAATACACTGGCATTGGATCATCCAAGGGAAAGAGAAGGAGGATGCTTTCAGATGAGGCTATCATACAGTCCAGTGGCTCCACTTTTTCTCTCACTTGTTCAGTGGACCGATTACCGACTTGCTGGTGCTCTTGGTTTGCTCAGAATTCTAATTTATGTGACATATGGAAATGGGAAGACTACTATTGCAATATATGAAAGGAAAGCAAGCATTAGACAATTTTATTCGATTATATTTCCTGCTCTATTGCAACTTCAGAAAGGCATCACAGATTTGGAAGAAAGGAAACAGAAAGAAGTATATGCTAATAGATATCAAAAGAAGACTGATTTCAAAGATAGAAGAGAATCTAAAATTGACATTGAAAGAGAACAGGAATGTGGAGTTTGCTTGGAGGTGAAAGCAAGAGTTGTGCTGCCTAATTGTTGCCATCAAATGTGTTCCGAGTGTTACAGAGACTGGTGTCTTAGGTCTCAATCTTGCCCCTTTTGCCGGGATAGCTTGAAGAGAGTAAACTCTGCTGACCTTTGGATTTACACAGACACAAGTGACATTGTTGATATTGGGACAATTTTCAAAGAGAATTGTAAGATTCTGTTTCTTTACATAGAAAAGTTGCCTCTTATTATTCCAGACCCAAGACACGTGTCCTATGATCCATTTTTTAGGTAA 732 0.3839 MGKSLFQESLKALEADIQYANTLALDHPREREGGCFQMRLSYSPVAPLFLSLVQWTDYRLAGALGLLRILIYVTYGNGKTTIAIYERKASIRQFYSIIFPALLQLQKGITDLEERKQKEVYANRYQKKTDFKDRRESKIDIEREQECGVCLEVKARVVLPNCCHQMCSECYRDWCLRSQSCPFCRDSLKRVNSADLWIYTDTSDIVDIGTIFKENCKILFLYIEKLPLIIPDPRHVSYDPFFR* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g3305 243 ProSitePatterns Zinc finger RING-type signature. 162 171 IPR017907 -
Mal2g3305 243 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 243 - -
Mal2g3305 243 ProSiteProfiles Zinc finger RING-type profile. 147 185 IPR001841 -
Mal2g3305 243 SUPERFAMILY RING/U-box 136 190 - -
Mal2g3305 243 PANTHER RING FINGER PROTEIN 41, 151 1 243 - -
Mal2g3305 243 Pfam Zinc finger, C3HC4 type (RING finger) 144 190 - -
Mal2g3305 243 SMART ring_2 147 184 IPR001841 -
Mal2g3305 243 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 110 196 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g3305 Mal-Chr2 49310712 49313496 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g3305 104 203 C3H Transcription Factor Family AT5G01960 28.000 7.60e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g3305 - K25840 gmx:100808567 426.017