Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g3296 ATGTCTAGGGAATTTGGGTTCATCAAGGACCTGAAAAAGGACTTAGAAATCTGTAAAATTGGCTTTAGGGTTCTTGACTCATGGGTTGTCACTGCTAGCAATGGCCGTCAGCACTTGGAACTTATAATTGGTGATGCAAAGTGTGACAGAGTTCATGTCATAACTCGACATGCAGATTTTGAGCGTTTGAAGTCATTGATCGAAGAAAACCAGACTTATGTTTTGCATAATTGTCTTGTGTTCGATAATGATGTTGCATTTAAGCCTATTGATTATCCTTTTAAGGTGGTGTTTGGTGCTGGTACAAAGGTGACAAGGAATGACAAGCTGACTGATATTCCATCTCATGAATTTAGATTTAAGTCATTCAAGGAAGTTGGAGAAGGAATATTTAAAACCGATGTTTTATATGAAATCATTGGTCTTATTCATGGGATTGCTAAGACAACGGTGGTTGGAGATGGAAAAAAACCTTGCACTAATATTGTGCTGAAAGATGAAAGTGGAAATTTGGTTGATGTGACATTATGGGATAGATATGCTCTAGATTTGATGAAATTTCTTGCTGAGCGGAAGGATAGAGGGGCATTTGTTTTGATATTAACTCACGCTCAATGCAAGCTTGCATATAATGGTAAGCCGAATCTTTCCAACAATTGGTCAGGTTCAAAGTTGCTTATTAATTTGAAGCATCCAGTTGTCGACACTTTTAGAGCTAGTTTTAAAAGTCAAGGACATAGCTTTAGTCAAATTCTATGTCAGGGTTCAGCCTCTTCTCACCGTTCTAAGTATGATGAATTTCCGAATCTCTCTAATGCTCGATCGATTGCTGAGTTTAGAAATTTTCCTAAGTTTAGTTTTGATACCTATTGCATCACTGTTGGGAAGACAGTTAAGTTCAATCCTAATCAATTTGGATGGTATTATGAAAGCTGTACTAAATGTACTAAGTCTTCAAAGTCAGGTGGTGCGAGCTACACATGCTCATGTGGGGAGGATGTTCAGGTTCCATTAACTAGGTATAAGGTGGTTATGCAAATGGTCTATGATGGTCATAAGGCTGAATTTTTATTTTGGGATTCAGAATGTTTTCAAATTCTTGGTATTACTGCTGAAGCTCTTAGAAAGTCAATGCAAGAGGTAAATCTAACTATGTTATTTAGTTTTAGTTCTTCTTTTAATATTGTTTATAGGTATTAG 1200 0.3658 MSREFGFIKDLKKDLEICKIGFRVLDSWVVTASNGRQHLELIIGDAKCDRVHVITRHADFERLKSLIEENQTYVLHNCLVFDNDVAFKPIDYPFKVVFGAGTKVTRNDKLTDIPSHEFRFKSFKEVGEGIFKTDVLYEIIGLIHGIAKTTVVGDGKKPCTNIVLKDESGNLVDVTLWDRYALDLMKFLAERKDRGAFVLILTHAQCKLAYNGKPNLSNNWSGSKLLINLKHPVVDTFRASFKSQGHSFSQILCQGSASSHRSKYDEFPNLSNARSIAEFRNFPKFSFDTYCITVGKTVKFNPNQFGWYYESCTKCTKSSKSGGASYTCSCGEDVQVPLTRYKVVMQMVYDGHKAEFLFWDSECFQILGITAEALRKSMQEVNLTMLFSFSSSFNIVYRY* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g3296 399 SUPERFAMILY Nucleic acid-binding proteins 118 247 IPR012340 -
Mal2g3296 399 SUPERFAMILY Nucleic acid-binding proteins 4 113 IPR012340 -
Mal2g3296 399 Gene3D - 111 251 IPR012340 -
Mal2g3296 399 Gene3D - 4 106 IPR012340 -
Mal2g3296 399 PANTHER REPLICATION FACTOR A 1, RFA1 62 360 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Mal2g3296 399 PANTHER RPA1 DOMAIN PROTEIN, PUTATIVE-RELATED 62 360 - -
Mal2g3296 399 CDD RPA1_DBD_B_like 139 242 - -
Mal2g3296 399 Gene3D - 257 394 IPR012340 -
Mal2g3296 399 SUPERFAMILY Nucleic acid-binding proteins 288 380 IPR012340 -
Mal2g3296 399 CDD RPA1_DBD_A_like 19 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g3296 Mal-Chr2 49179911 49181828 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g3296 73 374 Core DNA Replication Machinery Family AT5G08020 23.418 6.58e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g3296 - - mtr:MTR_8g076570 608.986