Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g3293 ATGGAAGAAGATTCATCCCATAACTTTCACAAATCTAAGGCACCTTCTTGTTCTTTAATTGCATCTACTTCTAAAGCTAACCATGAAGATTCAAATGAGAACCAACAAGATCAACTTAACACCATGCTTTATGGTGTTAACATTTCAATCACAAACCCATTCATGAGTTTCATGTGGAATGATGTTTGGTCTTGCATTGTTGTGCTAGTGCTATTTTGGCTCATTGCATCTGTAACTCTGGCTGTTGGTGTCCATGGATCTGTTAATTTACAATTGGGACCTTACTCCTCAAGTTTGATAGAAATCAACTCAATGTTTGTACAGTCTATCAAGGTGGAACAAAATAATAATCCAAAACCTGGTCTAATGCTTTATGGATTTGATCATCCTCCTCCACTAGATGTAAAAATAAATTGGACTGAGATGTATGATGCAACCATACCAGCAAAATCTCAAAAGGAATGGATATTCTACTTGAATAAAGATTCACAATTAGATGTTTCTTACAATGTTATGTCCCTAGTAGACCCTTTATTCCTTGTAATTGCTAAAGGTAGAGAAAGCCTAATTGAGTGGAAAAAGGATCCATCATTCCCTAATACAACATTGTATTGGAATAATATCTATGGAAGTGGTAGTATCACACAAAAAATATCACATTCATCTACTTATTATGTGGCTATTGGCAATATGAAACCTCAAAATGAAAAGGTACAATTGAAATTCACTGTAGATGCACTTCTTTACAATACAACTAGCTCTTATAACAAATGTTCTCTGGATAAAGGTTTATGTAGATTAAGCCTTGATCTTTCATCAAACTTAGCACTATTAACTACTCCAGGTCCTAGAGAGGGTCTTTCTAATCAAGAATGGTTTGATGTGAATATTTCTTATGAACCAAGATGGATCATATATTTTCTAGGATCAGGTGTGATAATTGTGCAAATCCTATTTTCCTTGAAATTCTACAAAATGTTCCGAACAAACAATGAAGAAAATGCAGGGTTCCAACAAGTGGAAGTGATTTCAGAACGAGCTCCACTATTGTCTAGTAAAGATAGTGATTCTTCAAGCTGGAGTTCATCTTATAATTCTTTCTCCAGTGAAAATTCTGATGAAGGAAATTCAATAATTGAAGGTGAAACCAGTAATCTTCAATGTTTGTGTGTTATTTGCTTTGATGCCACAAGGGATTGCTTTTTTCTTCCATGTGGCCATTTTGCAACATGCTTTGCGTGTGGAACAAGAATTGCTGAAGAAACTTGTAGCTGTCCCATTTGCAGAAGGAAATTGAAGAAAGTAAGAAAAATTTATATTGTGTAA 1326 0.3454 MEEDSSHNFHKSKAPSCSLIASTSKANHEDSNENQQDQLNTMLYGVNISITNPFMSFMWNDVWSCIVVLVLFWLIASVTLAVGVHGSVNLQLGPYSSSLIEINSMFVQSIKVEQNNNPKPGLMLYGFDHPPPLDVKINWTEMYDATIPAKSQKEWIFYLNKDSQLDVSYNVMSLVDPLFLVIAKGRESLIEWKKDPSFPNTTLYWNNIYGSGSITQKISHSSTYYVAIGNMKPQNEKVQLKFTVDALLYNTTSSYNKCSLDKGLCRLSLDLSSNLALLTTPGPREGLSNQEWFDVNISYEPRWIIYFLGSGVIIVQILFSLKFYKMFRTNNEENAGFQQVEVISERAPLLSSKDSDSSSWSSSYNSFSSENSDEGNSIIEGETSNLQCLCVICFDATRDCFFLPCGHFATCFACGTRIAEETCSCPICRRKLKKVRKIYIV* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g3293 441 Pfam Zinc finger, C3HC4 type (RING finger) 388 435 - -
Mal2g3293 441 Pfam Domain of unknown function (DUF4792) 121 189 IPR032008 -
Mal2g3293 441 ProSiteProfiles Zinc finger RING-type profile. 390 429 IPR001841 -
Mal2g3293 441 PANTHER OS05G0521000 PROTEIN 40 441 IPR044586 GO:0004842
Mal2g3293 441 SUPERFAMILY RING/U-box 389 435 - -
Mal2g3293 441 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 365 441 IPR013083 -
Mal2g3293 441 PANTHER OS05G0521000 PROTEIN 40 441 - -
Mal2g3293 441 Pfam Domain of unknown function (DUF4793) 214 319 IPR032010 -
Mal2g3293 441 SMART ring_2 390 428 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g3293 Mal-Chr2 49160808 49164821 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g3293 390 438 C3H Transcription Factor Family AT3G06140 34.694 7.19e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g3293 - - mtr:MTR_3g463920 589.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g3293 2 49160808 49164821 Mal2g3293 2 49160808 49164821 ECH