LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal2g3289	ATGTTGGGTGGTTCTTGTCCTGTTGCCATGTCTACTCCAACCGAAAAGTACGATGTATTTCTCAGTTTTAGAGGAGAGGATACTCGTGACAACTTCATCAGTCATCTTTCTGCAGAATTATGCAGGAAAAATATCAAAACCTTCATAGATTACAGATTAGACAGAGGCAAAGAGATTTCACCGGCACTGTACACAGAAATAGAACAATCAATGATTTATGTCATCATTTTATCTGAGCACTATGCTTCTTCCACATGGTGTATGGATGAACTCACAAAGATACTCGAGTGCAAACAAATATATGGAAGGGATGTGATACCGGTCTTCTACAAGGTGGATCCATCAAATGTTAGGAATCAGAGAGAGAGTTTTGAGGAAGCTTTTATTGAGCATCAACAGCGATTTACGGACAAAGTGGGCACATGGAAGGATGCTCTAACTCAAGTAGCTGGCCTCTCAGGCTGGGATTCACAAGTAACCAGTCCAGAACATACACTTGTTACTGACATTGTGGAAGAGATTCTGCGGAAAAAAAAGAATCGTCATCGTTTCCTAAGCAATTGTGAAGGAGTGATTGGAATGGAGAAGCACATAGAACAAATCAAGTCTTTGTTGCACCTTGAATCACCACCTGTTCGGATCATAGGAATTTGGGGTATGGGAGGAATAGGCAAAACCGAAATTGCCCGTGCAATATATCACAGGTTCGCAACTCAATTCAATTCTAGCAGCATGATTCTAAATGTTGAACAAGAAATAAAAAGAGTTGGACTACTCAATATACATAACCAGTATATGTCAGAGCTTCTAGAGGAAGACAAACTATCCTCTAAATTACAGTGCTCTTATGTTCAAAGGCTTCGACAAACAAAGGTTCTCCTTGTTCTTGATGATGTGAACACTTCAAATTTGACTATAAAGCATTCTAACTTTGGCCAAGGTAGTAGAATCATTATGACTAGTAGAGACAAACATGTGCTTAAGAATGCTATTGCAGATGAAATATACGAAGTCAAGGACATGTGTTTTCAAGATTCACTACAACTCTTCAGTTTAAATGCCTTTAAACAAAACTATCCTATAAAAGCTTATGTAGACTTATCAGAAAAGCTGGTATTAAACTATGCTATAGGGGTTCCACTAGCTCTCAAGAATTTGGGGTTACTGCTTCATGGTAGAAGAAGGGATGCATGGGAAAGTGAATTGCAAAAGTTGCAAGAGTTTCCTGATGAGGAAACTTTCGAAGTGTTGAAATTAAGTTATGACTCGCTTGATGACCGACAGAAGAATATGTTTCTTGACATAGCTTGCTTCTATACAGGACATTTGGTGAATGATGTCGCACAAACACTAGATAGTTGTCGTTTCTCTTCTGACATTGGAATGGATGTTCTTAAAGATAAAGGCCTAATATCTATTTCAGAAGGTAGAATTGTGATGCATTATTTAATACAGAAAATGGGACATGAAATTGTTCGTCAGGAGTGTGTTGATGATCCTGGAAACCGTACTCGATTGTGGAATCCTGAGGAAATTTATCATGTTTTAAAAAACAAGGGGACAAATGAAATCCGGTGTATATTCCTGGACATATGCGAAATAAATAAGGTTCAAGTTCATCCTAAAACTTTCAAAAAGATGAGTAATCTTCGAATAATTCAGTTTTATAAGCCTTCTGGCTTTTGGACAGACGACTCGAATGTGATCCTGCCTGAATCTCTTGAAAGCCTTCCTCATACATTAGTATTTCTTCGTTGGGATGACTTCTCTCAAAAATCTTTGCCGATGGAATTTTGTCCGAAAAACCTCGTTAAACTTGATTTGCGTGGAAGCGATCTTGAGCAACTTTGGGCGGGAGATCATGATAAGGTTTTACCGAAATTGAAAAGGCTTGATCTTAGTTATTCTCGGAAGCTTATTAGAATGCCAGACTTATCGCTATCTCCAAATATTGAAGAAATAATTCTTAGTGGTTGTGTAAGCTTGATTGACATTTACTCGTCCAGTTTCCTCAGCAAGCTCAACTGTTTATGTTTAAATGATTGTGTTGAGCTTAGGAGTTTGAATCTTCGAAGGGATGCTCGATCAAGATCTCCTGGATTAGTTGTTCTTTATGGTTGTGTCAAGCTTGAACTGTCTTCAGTCAGATGTAAAACTCAGGTGGTTCGTGTTGAAAATTTATATTTTCTATTCTAA	2196	0.3798	MLGGSCPVAMSTPTEKYDVFLSFRGEDTRDNFISHLSAELCRKNIKTFIDYRLDRGKEISPALYTEIEQSMIYVIILSEHYASSTWCMDELTKILECKQIYGRDVIPVFYKVDPSNVRNQRESFEEAFIEHQQRFTDKVGTWKDALTQVAGLSGWDSQVTSPEHTLVTDIVEEILRKKKNRHRFLSNCEGVIGMEKHIEQIKSLLHLESPPVRIIGIWGMGGIGKTEIARAIYHRFATQFNSSSMILNVEQEIKRVGLLNIHNQYMSELLEEDKLSSKLQCSYVQRLRQTKVLLVLDDVNTSNLTIKHSNFGQGSRIIMTSRDKHVLKNAIADEIYEVKDMCFQDSLQLFSLNAFKQNYPIKAYVDLSEKLVLNYAIGVPLALKNLGLLLHGRRRDAWESELQKLQEFPDEETFEVLKLSYDSLDDRQKNMFLDIACFYTGHLVNDVAQTLDSCRFSSDIGMDVLKDKGLISISEGRIVMHYLIQKMGHEIVRQECVDDPGNRTRLWNPEEIYHVLKNKGTNEIRCIFLDICEINKVQVHPKTFKKMSNLRIIQFYKPSGFWTDDSNVILPESLESLPHTLVFLRWDDFSQKSLPMEFCPKNLVKLDLRGSDLEQLWAGDHDKVLPKLKRLDLSYSRKLIRMPDLSLSPNIEEIILSGCVSLIDIYSSSFLSKLNCLCLNDCVELRSLNLRRDARSRSPGLVVLYGCVKLELSSVRCKTQVVRVENLYFLF*	732

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal2g3289	731	Gene3D	-	167	335	IPR027417	-
	Mal2g3289	731	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	177	435	IPR027417	-
	Mal2g3289	731	Gene3D	Ribonuclease Inhibitor	518	699	IPR032675	-
	Mal2g3289	731	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	11	715	IPR044974	GO:0006952
	Mal2g3289	731	Pfam	TIR domain	16	181	IPR000157	GO:0007165
	Mal2g3289	731	PANTHER	RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED	11	715	-	-
	Mal2g3289	731	PRINTS	Disease resistance protein signature	214	229	-	-
	Mal2g3289	731	PRINTS	Disease resistance protein signature	286	300	-	-
	Mal2g3289	731	PRINTS	Disease resistance protein signature	376	390	-	-
	Mal2g3289	731	PRINTS	Disease resistance protein signature	623	639	-	-
	Mal2g3289	731	SUPERFAMILY	"Winged helix" DNA-binding domain	413	517	IPR036390	-
	Mal2g3289	731	Gene3D	-	6	150	IPR035897	-
	Mal2g3289	731	SMART	AAA_5	211	342	IPR003593	-
	Mal2g3289	731	SUPERFAMILY	L domain-like	521	717	-	-
	Mal2g3289	731	Gene3D	-	343	425	IPR042197	-
	Mal2g3289	731	Pfam	NB-ARC domain	195	411	IPR002182	GO:0043531
	Mal2g3289	731	ProSiteProfiles	TIR domain profile.	15	174	IPR000157	GO:0007165
	Mal2g3289	731	SMART	till_3	16	152	IPR000157	GO:0007165
	Mal2g3289	731	SUPERFAMILY	Toll/Interleukin receptor TIR domain	11	155	IPR035897	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal2g3289	Mal-Chr2	49117631	49120360	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal2g3289	7	710	WRKY Transcription Factor Family	AT4G12020	32.873	2.81e-92	314

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal2g3289	-		-	mtr:MTR_3g464030	1305.81