Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g3284 ATGTGCAACGGTTCGAATAGAAAACCTTGTCAAACTGGTTTGATTAGGGAACATGAATATGGAAGACAAGAAGAACTTCATCATAAGATTTCTGCTTTGCTCGAGTTTTCAGCCAAAGATGATGTGATAGCTTTCAAAGATGCAGTTGAAAAAGATGAACATGATGTTGATGAGGTAGGGTTATGGTATGGAAGAAGGGTTGGATCAAAGGAAATGGGATATGAAGAGAGGACACCTCTTATGGTTGCTGCCTTATTTGGAAGCAAGGGTGTGCTGTCTTATATTCTTGGAACCGGTCGTGTTGATGTTAACCGAGTGTGCGGCTCAGATAGGGCTACTGCTCTTCATTGTGCAGTTTCTGGTTGTTCTGCTGCTTCTGCTGAGGTCATTAAGCTTTTACTTGATGCATCTGCAGATGTTGGTTCCGTTGATGCAAACGGTTACCGGTGCAGCGACTTGATTGTCTTGGTTTCTAGTAGTATCTTTGGTTCAAGGAAGAGGATACTACAAGCCATACTAGATGGCGTAGATGATGTTGATGACGAGTACAATTTCCTGAAGGAAATAGGTTTCCAATTGGTTGAGCAGCAACAAGATGTAGGTACACCTCGAACTGAGAAGAAAGATTATCCGATTGATCCATCCCTACCTGACATAAACAATGAGAAATATAGTACAGATGAATTTAGGATGTTTACATTCAAAGTGAAGCCTTGTTCAAGGGCTTATTCTCATGATTGGACTGAGTGTCCCTTTGTTCATCCAGGGGAAAACGCAAGGCGCCGTGATCCGAGGAAATGTGATTACACCTGTGTCCCTTGCCCTGTGTTTCGGAAAGGTTCATGCAGCAAAGGGGATGCTTGTGAATATGCTCATGGTATTTTTGAATGCTGGCTTCATCCTGCTCAATACAGAACAAGGCTTTGCAACGATGGAACCGGATGCACCAGAAGGGTTTGCTTTTTCGCTCACAAACTAGAGGAGCTTCGACCGTTGTATGCTTCTACCGGTTCAGCTTTGCCTTCACCTACATCATATTCAAATTCACCTAGTGCTTCTTCAACAGATTCTTTCACATTGAGCTCTCCGTCTTCTTTGATACAATCTGCGCCGACGCCACCTTTCACTCTATCTGCAGCATCATCGCCTGCGGCTGGAACCATGTGGCAGACTCAGATTCAGCTTCATACTGCAGTTCCAACCCTTCAGATGCCGCGATACAGATTGAAAACTGCACTGGATGCAATAGATAACACTCAATTTGTCGAACTTGAAAATCGCCTTATGATGGAAGAGATGACAGGTCTTTCATCTGCTTCAAGTAGGCTTGCAGGAGTTAATCCTGCTAACCTTGAAAACATTTTCGGGTCAACGATACAATCTCCGACATCAATGCAGTCGCATCAGAACGTGAACCAGCAACTATGGGGCTATCCTTCTGATCTTACCCATTCAAATGTAATTGGATCACAACAATTCAGAGTTGATGCCTTTTCAAAGCGGAGCCAGAGCTTTATTGAGCGCAGCAGCGTGGAGAGCTTTAATTCCGAGCTTCCTTCTGCTACCTCACTTTCCATGGATCCTTGTTGGGGCTCCCCTGATGGAAAATTAGACTGGTCCATCCGCGGCGATGAGCTCAATAAAATGAGGAAATCTTATTCTTTCGGTTTTCGAAACAGAAGTAGCACTTCAACAATCACTGCTGCATCAAATGTCGATGATCCAAGTATATTTTTCAGCCAGGAATCTTGGGTTAATTCACTTGTGAAGGATGCTCCAACTATGGAATTTGATCAGTATTGTGTTGAAGTTGAAGATCAAATGCAATTTCATAATCCGGACGCGGTTCCATCTTGGCCGGAGCATTTGTACATGGAGCATGAGCAGATGGTGGTGTGA 1899 0.4381 MCNGSNRKPCQTGLIREHEYGRQEELHHKISALLEFSAKDDVIAFKDAVEKDEHDVDEVGLWYGRRVGSKEMGYEERTPLMVAALFGSKGVLSYILGTGRVDVNRVCGSDRATALHCAVSGCSAASAEVIKLLLDASADVGSVDANGYRCSDLIVLVSSSIFGSRKRILQAILDGVDDVDDEYNFLKEIGFQLVEQQQDVGTPRTEKKDYPIDPSLPDINNEKYSTDEFRMFTFKVKPCSRAYSHDWTECPFVHPGENARRRDPRKCDYTCVPCPVFRKGSCSKGDACEYAHGIFECWLHPAQYRTRLCNDGTGCTRRVCFFAHKLEELRPLYASTGSALPSPTSYSNSPSASSTDSFTLSSPSSLIQSAPTPPFTLSAASSPAAGTMWQTQIQLHTAVPTLQMPRYRLKTALDAIDNTQFVELENRLMMEEMTGLSSASSRLAGVNPANLENIFGSTIQSPTSMQSHQNVNQQLWGYPSDLTHSNVIGSQQFRVDAFSKRSQSFIERSSVESFNSELPSATSLSMDPCWGSPDGKLDWSIRGDELNKMRKSYSFGFRNRSSTSTITAASNVDDPSIFFSQESWVNSLVKDAPTMEFDQYCVEVEDQMQFHNPDAVPSWPEHLYMEHEQMVV* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g3284 632 Pfam Ankyrin repeats (many copies) 76 134 IPR002110 GO:0005515
Mal2g3284 632 Gene3D - 26 162 IPR036770 -
Mal2g3284 632 ProSiteProfiles Ankyrin repeat profile. 110 145 IPR002110 GO:0005515
Mal2g3284 632 SMART ANK_2a 75 105 IPR002110 GO:0005515
Mal2g3284 632 SMART ANK_2a 110 142 IPR002110 GO:0005515
Mal2g3284 632 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 66 19 631 - -
Mal2g3284 632 SMART c3hfinal6 268 294 IPR000571 GO:0046872
Mal2g3284 632 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 273 293 IPR000571 GO:0046872
Mal2g3284 632 Gene3D - 268 331 - -
Mal2g3284 632 PANTHER UNKEMPT FAMILY MEMBER 19 631 IPR045234 -
Mal2g3284 632 ProSiteProfiles Zinc finger C3H1-type profile. 268 295 IPR000571 GO:0046872
Mal2g3284 632 SUPERFAMILY Ankyrin repeat 45 155 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g3284 Mal-Chr2 48972950 48974848 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g3284 25 556 C2H2 Transcription Factor Family AT5G12850 41.148 2.24e-132 403
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mal2g3284 Ank_4 6.9e-05 CL0465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g3284 - - mtr:MTR_1g075890 923.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g3284 2 48972950 48974848 Mal2g3284 2 48972950 48974848 ECH
Mal8g1801 8 36473524 36475638 Mal2g3284 2 48972950 48974848 ECH