Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g3283 ATGTGCAACGGTTCAAATAGAAAACCTTGTCAAACTGGTTTGATTAGGGAAAATGAATATGGAAGACAGGAAGAACTTCATCATAAGATTTCTGCTTTGCTTGAGTTTTCAGCCAAAGATGATGTGATAGCTTTCAAAGATGCTGTTGAAATTGGCGATCGTGATGTGGATGAGGTAGGATTGTGGTATGGAAGGAAGATTGGCTCAAAAGAAATGGGATATGAAGAGAGGACACCTCTTATGGTTGCTGCCTTATTTGGAAGCAAGGTTGTGTTGTCTTATATTCTTGGAACCGGTCGTGTTGATGTTAATCGAGTGTGCGGCTCAGATAGGGCTACCGCTCTTCATTGTGCAGTTTCTGGTTGTTCTGCTGCTTCTGCTGAGGTTATTAAGCTTTTACTTGATGCATCTGCAGATGTTGGTTCCGTTGATGCAAACGGTAACCGGTGCAGCGACTTGATTGTCTCGGTTTCTAGTAGTATCTTTGGTTCAAGGAAGAGGATACTACAAGCCATACTAGATGGCGTAAATGATGTTGATGACGAGTACAATTTCCTGAAGGAAATAGGTTTCCAATTGGTTGAGCAGCAACAAGATGTAGGTACACCTCGAACTGAGAAGAAAGATTATCTGATTGATCCATCCCTACCTGACATAAACAATGAGATATATAGTACAGATGAATTTAGGATGTTTACATTCAAAGTGAAGCCTTGTTCAAGAGCTTATTCTCATGATTGGACTGAGTGTCCCTTTGTTCATCCAGGGGAAAACGCAAGGCGCCGTGATCCGAGGAAATGTGATTACACCTGTGTCCCTTGCCCTGAGTTTCGGAAGGGATCATGCAGCAAAGGGGATGCTTGTGAATATGCACATGGTATTTTTGAATGCTGGCTTCATCCTGCTCAATACAGAACAAGGCTTTGCAAGGATGGAACCGGATGCACCAGAAGAGTTTGCTTTTTTGCTCACAAACCCGAGGAGCTTCGACCATTGTATGCTTCTACCGGTTCAGCTTTGCCTTCACCTACATCATATTCAAATTCACCTAGTGCTTCTTCAATGGATTCTTTCACATTGAGCTCTCCGTCTTCTTTGATACAATCTGCGCCGACGCCACCTTTCACTCTATCTGCAGCATCATCGCCTGCGGCTGGAACCATGTGGCAGACTCAGATTCAGCTTCATACTGCAGTTCCAACCCTTCATATGCCGCGATACAGATTGAAAACTGCACTGGATGCAATAGATAACACTCAATTTGTCGAACTTGAAAATCGCCTTATGATGGAAGAGATGACAGGTCTTTCATCTCCTTCAAATAGGCTTGCAGGAGTTAATCCTACTAACCTTGAAAACATTTTTGGGTCAACGATACAATCTCCGACATCTATGCAGTCGCATCAGAACGTGAACCAGCAACTTTGGGGCTATATTTCTGATCTTACCAATTCAAATGTTATTGGTTCACCACAATTCAGAGTTGATGCCTTTTCAAAGCGGAGCCAAAGCTTTATTGAGCGCAGAAGCGCGGAGAGCTTTAATTCTGAGCTTCCTTATGCTGCCTCACTTGCCATGGATCCTTGTTGGGGCTCCCCTGATGGAAAGTTAGACTGGTCCATCCGCGGCGATGAGCTCAAGAAAATGAGGAAATCTTTTTCTTTCGGTTTTCGAAACAGAAGTAGCACTTCAACAATGGCTGCTGCATCATTTGTCGATGATCCAAATGTACTTTTAAGCCAGGAATCTTGGGTTTATTCACTTGTGAATGATGTTCCTGCGATGGAATTTGATCAATATTATGTTGAAGTTGAAGATCAACTGCAATGCCATAATCCGGATGCGGTTTCGTCTTTGCCGGAGCAATTTTACATGGAGCATGAGTAG 1887 0.4319 MCNGSNRKPCQTGLIRENEYGRQEELHHKISALLEFSAKDDVIAFKDAVEIGDRDVDEVGLWYGRKIGSKEMGYEERTPLMVAALFGSKVVLSYILGTGRVDVNRVCGSDRATALHCAVSGCSAASAEVIKLLLDASADVGSVDANGNRCSDLIVSVSSSIFGSRKRILQAILDGVNDVDDEYNFLKEIGFQLVEQQQDVGTPRTEKKDYLIDPSLPDINNEIYSTDEFRMFTFKVKPCSRAYSHDWTECPFVHPGENARRRDPRKCDYTCVPCPEFRKGSCSKGDACEYAHGIFECWLHPAQYRTRLCKDGTGCTRRVCFFAHKPEELRPLYASTGSALPSPTSYSNSPSASSMDSFTLSSPSSLIQSAPTPPFTLSAASSPAAGTMWQTQIQLHTAVPTLHMPRYRLKTALDAIDNTQFVELENRLMMEEMTGLSSPSNRLAGVNPTNLENIFGSTIQSPTSMQSHQNVNQQLWGYISDLTNSNVIGSPQFRVDAFSKRSQSFIERRSAESFNSELPYAASLAMDPCWGSPDGKLDWSIRGDELKKMRKSFSFGFRNRSSTSTMAAASFVDDPNVLLSQESWVYSLVNDVPAMEFDQYYVEVEDQLQCHNPDAVSSLPEQFYMEHE* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g3283 628 MobiDBLite consensus disorder prediction 334 353 - -
Mal2g3283 628 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 273 293 IPR000571 GO:0046872
Mal2g3283 628 ProSiteProfiles Ankyrin repeat profile. 110 145 IPR002110 GO:0005515
Mal2g3283 628 MobiDBLite consensus disorder prediction 337 353 - -
Mal2g3283 628 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 66 19 626 - -
Mal2g3283 628 Gene3D - 26 171 IPR036770 -
Mal2g3283 628 PANTHER UNKEMPT FAMILY MEMBER 19 626 IPR045234 -
Mal2g3283 628 SMART ANK_2a 110 142 IPR002110 GO:0005515
Mal2g3283 628 SMART ANK_2a 75 105 IPR002110 GO:0005515
Mal2g3283 628 Pfam Ankyrin repeat 113 144 IPR002110 GO:0005515
Mal2g3283 628 Gene3D - 270 331 - -
Mal2g3283 628 ProSiteProfiles Zinc finger C3H1-type profile. 268 295 IPR000571 GO:0046872
Mal2g3283 628 SUPERFAMILY Ankyrin repeat 39 150 IPR036770 -
Mal2g3283 628 SMART c3hfinal6 268 294 IPR000571 GO:0046872
Mal2g3283 628 SMART c3hfinal6 303 326 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g3283 Mal-Chr2 48964477 48966363 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g3283 25 556 C2H2 Transcription Factor Family AT5G12850 41.613 2.20e-134 408
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mal2g3283 Ank 0.002 CL0465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g3283 - - mtr:MTR_1g075890 959.133