Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g3273 ATGGAGGGTTTCGAAATTTCAAGAAACGTCAAGCGTAAAACCTCGTTTGCGCAACCAAAACTTCAAATCAATCAAAGGGTTGAGGTGAGGAGTTTTGAAGAGGGTTTTCTTGGATCATGGCATCCAGGGACAGTTATTGATTGTGAGAAGATGAAACGTCACGTTAGATATGAGAATATTCTGAATGATGATGAGTTGGGTTATTTTGTGGAGGTGGTGAGTGTTTCAAGTGTTTTCGATGGTGATTTAGGGTCATCGAGTAAACGCGGGAGGATTAGGCCAGTGCCTCCTTTGGTTGAGTTTGAGAAATGTGATCTTAAATATGGTTTGTGTGTTGATGTATATTATCAGGAAGCTTGGTGGGAAGGTGTTGTGAATGATAAGTGTGATGGAATGGAGGAGAGGACTGTGTTTTTCCCTGATTTGGGCGATGAAATGAAGGTCGGAATTCAGGAAATGCGGATTACTCAGGATTGGGATGAAGTTACGGAGAAGTGGGAGCGACGAGGGAAATGGTTGCTTCTTGAATTGATTGAGGAGTCGTATCTTCCGGTATCAGTACGGCAAATTTGGTATGATGTGCGACAAAAAATGGAATTTGCCGCGATTGGAGAATGGACATTGAATGAGAAGAAGGATTTGTGGAGGCACATGATAATGGAGGTAGTTGGTGACTACTTGGCTGTTACAGTAAAAGAAGTTTTCTTAGCCTTGAAACTTCCGGAGATGGAATCAGGTGAACTAATATCTAATGTTGATTCAAATGTGACCTTATCTGAAAATGAAAAGTTTGAGCAGAGCGAACCTGTTGTTCCTCCGGTTGAAAAGGACTTGCCTAAGTTTAAAAATGAAGTTTCCTTCAATGTTGAGTGGGAACGCGTAATATTTTCTGAAACTGAATACTCTCCCGATGTTGTTAAGCAATATGCGCTTGCTTCTGACAGCAAGAGGACTATGTCATCTTTGAAGGAAAAAGTATGGAAACATCTTGCATATCTTGGATGGGAAATTGATGTTGACCAATGGGGTAAACATTACAGGTACAAGCCACCCAATGGAATCCATTGCAACAAGAAAGTTTACTACTCACTTCTTGAACTTTGTAAAGAAATGCAAATGGAATCCATGGTGAACTCTTCTCTGCACAAGAATGATCTTGGTATAATTCATCCTGCCGGTGACTGTCACGTTCCACATGTGCCTCTTAATCCATCTGAAAAGATTCAGAACCTAGTTATATCCCCTCTAGTTGTGGGGCCTCCATCTGTTGCAGTGGCAGATGGAGATGGTTATTGTCCTCAAGCCATTGTGGAATACAACAAACGTGCACTCGAGAGGACCTGGCAACGGGCATATAAAAGTAGACTTATTTCAAAAGTAAGAAAACATCTGAAAGCAGAAGGATGGATTTTAATCGATCCACCTCCAAATAATAAAAGAAGAGGTGTTGTATACATTTCTCCACAGAAGCGGAGATTCATCTCACTGAATTCAGTATGCAGATTCTTACTTGAAGAATGTATTCAGAAATCGACTATTTCTGGCATGCAACATTTAAATACCTCGGCCATTCATGAGGAAAATGTTGATCAGGTATCGAGTGATGATTTATCAAGTAGAGACAGTGTTGCTGCGAATAGATCAAGTGCAAATCGGAAGCGGAAACACTTGAGGAATTCAGATGACAGCCTGCTGAAGCACCGAAGCGATGAATCAACTCTAAGGGTGCTGAGATCAAATGAAAGGGTGCCAAAGGCGTCTTCTGCTAGCCTTTTACATCATAAACCTTTAAATGTTCTGTCTTGGTTGATAGACAGCAACATGTTGTTACCAAGGTCCAAGGTTTTTTGTCGAGCAAAACGTGGGCACCGTGTTGTGCTTTCTGGGCGAATAACTCATGAGGGAATCAAGTGTAACTGTTGTTCAAGAATATACAGTCCTCGTTCCTTCGAATTTCATGCTACTGGCAGTAATTCCATCAGACCAAGTGCTAGTATCTTTCTGGACGATGGTAGGTCGCTCTTATCTTGCCAGATACAATTAATGCAAGATCACAAGTCTAAGGAGGCTATGATAAAACCAATCAGTGATTTGCGTCAAGGTGAAAACGACTACATTTGTTCCGTTTGCCACTATGGGGGCGAACTTCTTTTGTGTGATCGATGCCCGTCTTCATATCATAAGACGTGTCTTGGTCTGGAGGATGTCCCTGATGGTGAATGGTTTTGTCCATCGTGTCGATGCGGGATTTGTGGCCAAAGCAGATTCAATGCGGGTGGTGAGGATGAACATTTCCTTACATGCATTCAGTGTGAACATAAATATCATGTTGAGTGCCTGAAAAGTAGAGATACTAGTAAATCCGGAAGTTATGTGGAAAGCCAGTTCTGCTGTAAAGACTGTGAAAAGTTATATGCAGCCCTTCAAAGTCTGTTAGGACAGCCAGTTACAGTGGGTGTGGACAATCTAACATGGACATTGGTGAAGTGTGTCGACTCTGAGAGTTGTGATCTTGATAATAGTAAAAGTGAATTATTGGCAGAAAGTTACAGTAAACTCAATGTTGCTCTTTCATTGATGCATGAATGTTTTGAGCCCCTAAAGGAATCCTCTTCTTGCAGAGATCTGATGGAAAATGTTTTATTCAGCCAATGGTCCAAACTTAATCGAATGAATTTCCGGGGTTTCTATTCTGTACTTCTGGAGAGAAATGAAGATCTGGTCAGTGTAGCAACTATTAGGATCCTTGGAGATAAGGTAGCTGAAGTACCTCTTGTTGGTACCAGATTTCAGTATCGCCGTCATGGAATGTGTCGCATATTAATGGATGAACTGGAAAAGAAGCTCATGCAATTAGGAGTGGAGCGGCTTGTTTTGCCTGCTGTTCCCACTGTGGTAGATACATGGACCGGCGCTTTTGGATTTTCAAAGATGCCAAACTCTGAAAGATCACAATTTCTAAACTACACTTTCCTAGATTTTCCGGGTACCATCATGTGCCAGAAGTTTTTAACAAATGTTCCGTCTCCAAATTCGGTTTTGCCAACTGTGTTCCAACAAAAACAAGATGCCATCTCCGGGAGCAGTAGTGCTAGTAATAAGTCTCCAGTTTCTGAAGTTTACCAAGCAGGAGAGATAGACAAAAGAGAAGTGTTGGATCAACAAATGATGGATACTTCTGAAGGCAATAATGATAATCTTGGCATTGCTGTTGTTGACTGTGTCACCATGGCGGAGCAACCAATTCCTGAGGATCAACAACATTGCCAGAATGGAACCTCTCAAGGGAGCTCTTTTGTAAAGTGGAGTGGACTGGTCTACTCTAGACGAAAGAAGGCGAAAGGGGAACATGAAGCGTAG 3360 0.4179 MEGFEISRNVKRKTSFAQPKLQINQRVEVRSFEEGFLGSWHPGTVIDCEKMKRHVRYENILNDDELGYFVEVVSVSSVFDGDLGSSSKRGRIRPVPPLVEFEKCDLKYGLCVDVYYQEAWWEGVVNDKCDGMEERTVFFPDLGDEMKVGIQEMRITQDWDEVTEKWERRGKWLLLELIEESYLPVSVRQIWYDVRQKMEFAAIGEWTLNEKKDLWRHMIMEVVGDYLAVTVKEVFLALKLPEMESGELISNVDSNVTLSENEKFEQSEPVVPPVEKDLPKFKNEVSFNVEWERVIFSETEYSPDVVKQYALASDSKRTMSSLKEKVWKHLAYLGWEIDVDQWGKHYRYKPPNGIHCNKKVYYSLLELCKEMQMESMVNSSLHKNDLGIIHPAGDCHVPHVPLNPSEKIQNLVISPLVVGPPSVAVADGDGYCPQAIVEYNKRALERTWQRAYKSRLISKVRKHLKAEGWILIDPPPNNKRRGVVYISPQKRRFISLNSVCRFLLEECIQKSTISGMQHLNTSAIHEENVDQVSSDDLSSRDSVAANRSSANRKRKHLRNSDDSLLKHRSDESTLRVLRSNERVPKASSASLLHHKPLNVLSWLIDSNMLLPRSKVFCRAKRGHRVVLSGRITHEGIKCNCCSRIYSPRSFEFHATGSNSIRPSASIFLDDGRSLLSCQIQLMQDHKSKEAMIKPISDLRQGENDYICSVCHYGGELLLCDRCPSSYHKTCLGLEDVPDGEWFCPSCRCGICGQSRFNAGGEDEHFLTCIQCEHKYHVECLKSRDTSKSGSYVESQFCCKDCEKLYAALQSLLGQPVTVGVDNLTWTLVKCVDSESCDLDNSKSELLAESYSKLNVALSLMHECFEPLKESSSCRDLMENVLFSQWSKLNRMNFRGFYSVLLERNEDLVSVATIRILGDKVAEVPLVGTRFQYRRHGMCRILMDELEKKLMQLGVERLVLPAVPTVVDTWTGAFGFSKMPNSERSQFLNYTFLDFPGTIMCQKFLTNVPSPNSVLPTVFQQKQDAISGSSSASNKSPVSEVYQAGEIDKREVLDQQMMDTSEGNNDNLGIAVVDCVTMAEQPIPEDQQHCQNGTSQGSSFVKWSGLVYSRRKKAKGEHEA* 1120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g3273 1119 SMART agenet_At_2 19 100 IPR014002 -
Mal2g3273 1119 SMART agenet_At_2 104 161 IPR014002 -
Mal2g3273 1119 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 697 748 IPR013083 -
Mal2g3273 1119 PANTHER PHD ZINC FINGER PROTEIN 312 1058 - -
Mal2g3273 1119 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 749 804 IPR013083 -
Mal2g3273 1119 ProSiteProfiles Zinc finger PHD-type profile. 745 804 IPR019787 -
Mal2g3273 1119 Pfam Tify domain binding domain 629 681 IPR032308 -
Mal2g3273 1119 PANTHER PHD ZINC FINGER PROTEIN 9 278 - -
Mal2g3273 1119 Pfam PHD-finger 706 748 IPR019787 -
Mal2g3273 1119 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 843 1001 IPR000182 GO:0016407
Mal2g3273 1119 MobiDBLite consensus disorder prediction 530 564 - -
Mal2g3273 1119 Pfam Agenet domain 25 97 IPR008395 -
Mal2g3273 1119 CDD NAT_SF 898 959 - -
Mal2g3273 1119 SMART PHD_3 748 802 IPR001965 -
Mal2g3273 1119 SMART PHD_3 706 747 IPR001965 -
Mal2g3273 1119 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 312 1058 - -
Mal2g3273 1119 SUPERFAMILY FYVE/PHD zinc finger 685 747 IPR011011 -
Mal2g3273 1119 Gene3D - 859 980 - -
Mal2g3273 1119 ProSiteProfiles Zinc finger PHD-type profile. 704 749 IPR019787 -
Mal2g3273 1119 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 9 278 - -
Mal2g3273 1119 CDD PHD2_CHD_II 707 746 - -
Mal2g3273 1119 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 885 982 IPR016181 -
Mal2g3273 1119 SMART ring_2 748 801 IPR001841 -
Mal2g3273 1119 SMART ring_2 707 746 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g3273 Mal-Chr2 48793745 48799880 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g3273 30 947 PHD Transcription Factor Family AT5G58610 37.462 0.0 608
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Mal2g3273 Agenet 1.1e-16 CL0049
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g3273 - - cam:101498411 1549.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g3273 2 48793745 48799880 Mal2g3273 2 48793745 48799880 ECH
Mal2g3273 2 48793745 48799880 Mal8g1779 8 35992738 35998693 PCT