Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g3260 ATGCAACCACAATCTAACTCACCCATCAAACCAATGAACTCACTCAAAGAAATATTCCAAAACATTTTCTCAGATAATAGCAACATCATGCTCGCTGCTATAATTTCTTTATTACTTGTCATTCTCTTTGTTTTGCTTCTTCATCTTTATGCTAAATGGTTCTTAGCTCAAGCACATGCTCAAGCACAAGCTCGTCGCCGCCGTCGCCGGAGAACTACCGTAACTGTCTCTGATGTCCTTGGACCTTCAAGGTTCCATCACTTTCACAGCTTCAACATTGAAGACTCACCTTTGTCTAGCTCACAAACCAAAGGACTTGATTCTTCTATCATTGCTTCAATTCCTTTGTTTATTTATGCAGAGAAGAATGAATGTAAAGATGAAATTGAACAAGAGCTTGAATGTGTGATTTGTTTGAGTGGCTTTGAAGATGGTGAAATGGGAAGGTGTTTACCAAAATGTGGACATGGTTTTCATGTGGAGTGTATTGATATGTGGTTGAGTTCACATTCTAATTGTCCAATTTGTAGAGCTTCAATTGTTGTGTTTGAGAATGATTCTTCATGTGTTGTTGAAAATAATGTTGATGGTTCTAGTTTTGTTGAAATTGTGATTGATGAAAATTCTAGTTCTGAGATTAGAGAGGGTGAACAAGGAAATGATAATGGAAGGTTACAGAGTGATTCTGTTTCTGAATCTTCATCTTCATTGTTTGGTTGCTCTTTGAAGACAGTTTTCAACAAAGTTTTTCCATCTTCCAATGTTAATGTTGATGAATCACAATCTTAA 789 0.3638 MQPQSNSPIKPMNSLKEIFQNIFSDNSNIMLAAIISLLLVILFVLLLHLYAKWFLAQAHAQAQARRRRRRRTTVTVSDVLGPSRFHHFHSFNIEDSPLSSSQTKGLDSSIIASIPLFIYAEKNECKDEIEQELECVICLSGFEDGEMGRCLPKCGHGFHVECIDMWLSSHSNCPICRASIVVFENDSSCVVENNVDGSSFVEIVIDENSSSEIREGEQGNDNGRLQSDSVSESSSSLFGCSLKTVFNKVFPSSNVNVDESQS* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g3260 262 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 86 182 IPR013083 -
Mal2g3260 262 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 7 256 IPR044675 -
Mal2g3260 262 Pfam Ring finger domain 134 177 IPR001841 -
Mal2g3260 262 ProSiteProfiles Zinc finger RING-type profile. 135 177 IPR001841 -
Mal2g3260 262 SMART ring_2 135 176 IPR001841 -
Mal2g3260 262 MobiDBLite consensus disorder prediction 211 235 - -
Mal2g3260 262 CDD RING-H2_EL5_like 134 177 - -
Mal2g3260 262 PANTHER - 7 256 - -
Mal2g3260 262 SUPERFAMILY RING/U-box 125 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g3260 Mal-Chr2 48541774 48542562 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g3260 21 225 Rapid Response to Elicitors AT3G16720 33.493 2.74e-31 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g3260 - - lang:109329145 293.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g3260 2 48541774 48542562 Mal2g3260 2 48541774 48542562 ECH
Mal2g3260 2 48541774 48542562 Mal8g1752 8 35329096 35329770 PCT