Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g3252 ATGCCACAACAGGTGCAAAGTCGTGGTAATATTGATCCATTTAATTACAATGTAATATCACCAGAAAATCACCATGATACTCCACAGGTGCAAAGTGGTATTGATCCATTCAATTACAATATAATTTCACCAGAAAATGACCATGGTAATAATGATTTATTTTCCAATGCAATGTCACAACAAAGTAGCCATGGTATTCAACATGGACATGGTGGTAACAATGAAACATTTTCTCATGCAATGGTTCAAAATCAAAATAATCAGCAAAATAATAATATTTCATCTAGAGGAAATAACTTTGAAGTGGGTAATTCATCAACAGTGCATGAAAATCAACAACAAACCGAAGTGTTGCCAATTGTTCAATGGCCACCCCCACCACAACAATTTTCTTGCAGTTGTTGTCAAGTTCTTAGAGAATTCATTCATGCTAATGGTATTCAATTTGAAAAGCTTGAGATTCATGGAAAATTGGGGTTGATTTCACATGCAATTCACCATCAGACACCTGTTGATGGAGGCCCACCAATTTGTCAAATGATTGATTTTAATGGGAAAGGCCTTGGTGAAATAAGGAGTTTCCTGGCACAGTATTGTATGGAACGTAATTTAGCAGGGTATTTCCTTATGCAAGATCCATTGTATGCGTATTATGAGACTCTTTGCACTGGATATGATTGGATTGATGATATTAATATGGAGGGTCATAATGATAATAATTCAGATGAGATAATGGAGCAAGAACAAGAACAAGAGCAAGAGCACGAGCAAGTGGGTGAGAATGGAACACCTGGAAGAAGGAACCTTTCAGAACAGAGGAAAAAAGCTGCAAGATTTACTCTGAGTGATTTATGCGATTACTTTCATGTACCTATTGACATTGCATCGCATCGTGTGAATTTAGCTACATCAACTATCAAGAAAATTTGTCGTAAAGCAGAATTAACAAGATGGCCTCACAGAAAGGTGAAAAGTCTTTTGAAGCAGATAGCAATACTACAAAATCAATTGGATCGACAAGATCCGGCGACAAGGGCAAGGACTCTAGAGGAAATTAGTAGGCTTAAAAGTGACATGATTGACTGTTGTGGTGGACATGCACCAACCGCGCTGAATAATGTCGCCGACTTTTTGCCGCGGCACCATCGGCAGCAGCAGTAG 1161 0.3824 MPQQVQSRGNIDPFNYNVISPENHHDTPQVQSGIDPFNYNIISPENDHGNNDLFSNAMSQQSSHGIQHGHGGNNETFSHAMVQNQNNQQNNNISSRGNNFEVGNSSTVHENQQQTEVLPIVQWPPPPQQFSCSCCQVLREFIHANGIQFEKLEIHGKLGLISHAIHHQTPVDGGPPICQMIDFNGKGLGEIRSFLAQYCMERNLAGYFLMQDPLYAYYETLCTGYDWIDDINMEGHNDNNSDEIMEQEQEQEQEHEQVGENGTPGRRNLSEQRKKAARFTLSDLCDYFHVPIDIASHRVNLATSTIKKICRKAELTRWPHRKVKSLLKQIAILQNQLDRQDPATRARTLEEISRLKSDMIDCCGGHAPTALNNVADFLPRHHRQQQ* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g3252 386 Pfam RWP-RK domain 279 326 IPR003035 -
Mal2g3252 386 MobiDBLite consensus disorder prediction 251 272 - -
Mal2g3252 386 ProSiteProfiles RWP-RK domain profile. 260 347 IPR003035 -
Mal2g3252 386 MobiDBLite consensus disorder prediction 44 77 - -
Mal2g3252 386 MobiDBLite consensus disorder prediction 1 31 - -
Mal2g3252 386 MobiDBLite consensus disorder prediction 236 272 - -
Mal2g3252 386 Coils Coil 237 257 - -
Mal2g3252 386 PANTHER PROTEIN RKD4 21 364 IPR044607 GO:0003700
Mal2g3252 386 PANTHER RWP-RK DOMAIN PROTEIN 21 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g3252 Mal-Chr2 48001530 48003538 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g3252 230 349 AtRKD Transcription Factor Family AT4G35590 26.984 1.26e-08 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Mal2g3252 RWP-RK 1.4e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g3252 - - mtr:MTR_3g465110 467.618