Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g3246 ATGGTGCAAATAGAAGAGCAATCAGGGCCTAAAAATTCCAACCTAGTTGTTAGACCCTTTTCACATGGTCCTTCATCAGCATTTCGACCATGGCAACCCTTTTGGAAGAGTATTAGCCTTGGTAAACAAGAGGCAAGGAGCAGTGGAGTAAAAGCAACTCCACAAGAAAACAATAACATGAATATAGAAAAATCAAATCTTGTTCATGTTGAGAAGAACCACATCAATGGTGGTAGTGCAACTGGAGGTGCTAGTGTTTGTGATCAAGAAGCACAAAAAATGGATCCTAAGAAGCGAAAACGAATCCTAGCAAATCGAGCTGCTGCACGAAAATCGAGAATAAGAAAACTCGACTATATAGCAGATTTGGAACGGACAGAAAAATCTTTACAGGATAAGTTATCTTTCCTCCGTCCACAAATTGAAGTCTATAAAAATCAGCAATGGATGTTGCAGGTTGAGCATTACCAATTAAAACTTGAAATGGCTGCTAGGGAAAAAGAAACAATACTTCAAGAAGTGGAGATCAACAATATGAGAGCTGAGGTGAATAGGCTGAGGGAACTTCAGAAGAAACAAATGGTTGAAGTACAGAATGGGTCCTTTGAACTTTGA 615 0.3919 MVQIEEQSGPKNSNLVVRPFSHGPSSAFRPWQPFWKSISLGKQEARSSGVKATPQENNNMNIEKSNLVHVEKNHINGGSATGGASVCDQEAQKMDPKKRKRILANRAAARKSRIRKLDYIADLERTEKSLQDKLSFLRPQIEVYKNQQWMLQVEHYQLKLEMAAREKETILQEVEINNMRAEVNRLRELQKKQMVEVQNGSFEL* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g3246 204 MobiDBLite consensus disorder prediction 1 20 - -
Mal2g3246 204 PANTHER ACTIVATOR OF SPOMIN LUC3 11 198 - -
Mal2g3246 204 SUPERFAMILY Leucine zipper domain 97 151 IPR046347 GO:0003700|GO:0006355
Mal2g3246 204 Gene3D - 89 157 - -
Mal2g3246 204 CDD bZIP_plant_RF2 98 148 IPR044759 GO:0003700|GO:0006355
Mal2g3246 204 Pfam Basic region leucine zipper 95 146 IPR004827 GO:0003700|GO:0006355
Mal2g3246 204 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 95 158 IPR004827 GO:0003700|GO:0006355
Mal2g3246 204 Coils Coil 176 196 - -
Mal2g3246 204 PANTHER BASIC LEUCINE ZIPPER 34 11 198 - -
Mal2g3246 204 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 100 115 IPR004827 GO:0003700|GO:0006355
Mal2g3246 204 MobiDBLite consensus disorder prediction 1 22 - -
Mal2g3246 204 Coils Coil 153 173 - -
Mal2g3246 204 SMART brlzneu 93 164 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g3246 Mal-Chr2 47227656 47228997 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g3246 78 173 bZIP Transcription Factor Family AT2G42380 38.542 2.01e-16 73.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mal2g3246 bZIP_2 2.8e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g3246 - - mtr:MTR_3g465280 128.257