Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g3238 ATGAAAGAAGCGTGGAGATTCATAATGTTCTGTCGCATGGTGGTAGTTGGATTGATGATGTTTTTCATGTTGAGCATGAAACATGGTCAATGCTTGACTATGAACAACCAAGGGTTGACACTTCAAAGGATGAATGGTGAAGGAGTGATTGATCCATGCTATCATGGAAATATTGTGGCCTTGCACTTTAGCCAACAAGTGGATATACCATACAATAGGAAACTTCTACAAACATCAAATTCTGCTAACTCACACAAAACCAAGAGGTTTGATCACAAAAAGACTCCTTCACCTTCACCTTCATCATCACCAACATCTTCACTAGTTTCTCCATCACAAAGTCCCTCAAATTCACCATCACCATCATTTTTTCTTCCATCACTATTAACATCACCAGAACTTTCCCCTTCACCTTCACCTGTGATATCACCAACAACTTCACACTTACCATTTACATCAAATCCACCAAAGTCTAGTTGGATTTCAGCACCTTCGCCTGCTCCATCTTCGAACCAAATGAATTCACAAAGTTCAAACCGAAAGCAACATTCTGTTATTATATGGTCAACAGTTGGAGGCTTTTCCTTCCTTGTTTTGGTGACATTCACAGTTTTTATTTGCTTCAGAAGTAGTAAGGTTGTAACTGTCAAACCTTGGACCACAGGGTTGAGTGGCCAGCTTCGAAAAGCATTCGTAACAGGTATTCCAAGTCTTAAACGAGCTGAACTCGAACTAGCTTGTGAAGATTTCAGCAACATTATTGGTTCTCTACAAGATGAAACTATCTATAAAGGAACTCTTTCAAGTGGAGTTGAGATAGCCGTTGTATCCTCTGCAGCGACTTCATCGCAAGACTGGTCAAAAAATATGCAAGCTCAGTTCCGAAAAAAGATTGAGATGTTATCAAGGGTGAACCACAAGAATTTTGTGAATCTTATTGGTTATTGTGAAGAGAATAAGCCATTCACTAGGATGATGGTTTTCGAGTATGCTCCAAACGGAACGCTGTTCGAGCATCTACATATTAGAGAAGCAGAACAGCTAGACTGGGGAATGAGAAAGAGGATAGCTATGGGAATAGCTTATTGTCTAGACCGCATGCATCAACTCACACCACCTATGTCACACAGAAACTTGCAATCTTCCTCTATATACTTGACAGAAGATTATGCTGCTAAAATATCAGACCTTAGTTTCTACACTGACAAAGTTGATACAAAGAAGGGTTTTGAAAAAACTTCAGCAGAAGAAATAAAGGACAATGTTTATAGTTTTGGTGTAATATTGAGAGAGTTGGTGGATACAAGCTTGAAATCTTTGAAAGGTGATGAAGTTGAGAAATGGTTTGAAGTTATTAATAGTTGTGTAGATCCTGATGAAGAGAAAAGGTTATCAATGAAAGAGGTTACATCTAAATTGAAGGAAATTACTGATATGGGACCTGATGGTGCAACTCCAAAAACATCACCTCTTTGGTGGGCTGAAATAGAAATTATGTCCTCAGACATATGCTGA 1515 0.3875 MKEAWRFIMFCRMVVVGLMMFFMLSMKHGQCLTMNNQGLTLQRMNGEGVIDPCYHGNIVALHFSQQVDIPYNRKLLQTSNSANSHKTKRFDHKKTPSPSPSSSPTSSLVSPSQSPSNSPSPSFFLPSLLTSPELSPSPSPVISPTTSHLPFTSNPPKSSWISAPSPAPSSNQMNSQSSNRKQHSVIIWSTVGGFSFLVLVTFTVFICFRSSKVVTVKPWTTGLSGQLRKAFVTGIPSLKRAELELACEDFSNIIGSLQDETIYKGTLSSGVEIAVVSSAATSSQDWSKNMQAQFRKKIEMLSRVNHKNFVNLIGYCEENKPFTRMMVFEYAPNGTLFEHLHIREAEQLDWGMRKRIAMGIAYCLDRMHQLTPPMSHRNLQSSSIYLTEDYAAKISDLSFYTDKVDTKKGFEKTSAEEIKDNVYSFGVILRELVDTSLKSLKGDEVEKWFEVINSCVDPDEEKRLSMKEVTSKLKEITDMGPDGATPKTSPLWWAEIEIMSSDIC* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g3238 504 Gene3D Transferase(Phosphotransferase) domain 1 332 480 - -
Mal2g3238 504 MobiDBLite consensus disorder prediction 80 122 - -
Mal2g3238 504 MobiDBLite consensus disorder prediction 96 122 - -
Mal2g3238 504 PANTHER PROTEIN MALE DISCOVERER 2 429 501 - -
Mal2g3238 504 PANTHER PROTEIN MALE DISCOVERER 2 87 433 - -
Mal2g3238 504 Pfam Protein tyrosine and serine/threonine kinase 254 434 IPR001245 GO:0004672|GO:0006468
Mal2g3238 504 Gene3D Phosphorylase Kinase; domain 1 225 330 - -
Mal2g3238 504 MobiDBLite consensus disorder prediction 135 178 - -
Mal2g3238 504 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 429 501 - -
Mal2g3238 504 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 87 433 - -
Mal2g3238 504 SUPERFAMILY Protein kinase-like (PK-like) 232 473 IPR011009 -
Mal2g3238 504 ProSiteProfiles Protein kinase domain profile. 248 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g3238 Mal-Chr2 46919723 46923791 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g3238 234 478 Receptor kinase-like Gene Family AT3G19300 29.492 6.86e-30 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Mal2g3238 PK_Tyr_Ser-Thr 1.2e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g3238 - - var:108343001 526.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g3238 2 46919723 46923791 Mal2g3238 2 46919723 46923791 ECH